RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
CXXC1-210ENST00000587396 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.73
CXXC1-210ENST00000587396 SMAGPQ0VAQ4 97 aa10.46□□□□□ -0.73
CXXC1-210ENST00000587396 TPRXLQ17RH7 258 aa10.46□□□□□ -0.73
CXXC1-210ENST00000587396 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
CXXC1-210ENST00000587396 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
CXXC1-210ENST00000587396 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
CXXC1-210ENST00000587396 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
CXXC1-210ENST00000587396 TMEM191AQ9H0A3 160 aa10.45□□□□□ -0.74
CXXC1-210ENST00000587396 A8MWL6 223 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 LINC00469Q8N7U9 141 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 NRACQ8N912 160 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
CXXC1-210ENST00000587396 TEX46H3BTG2 121 aa10.43□□□□□ -0.74
CXXC1-210ENST00000587396 SUMO2P61956 95 aaKnown RBP10.43□□□□□ -0.74
CXXC1-210ENST00000587396 BORCS7Q96B45 105 aa10.43□□□□□ -0.74
CXXC1-210ENST00000587396 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
CXXC1-210ENST00000587396 A0A1B0GUT8 65 aa10.42□□□□□ -0.74
CXXC1-210ENST00000587396 NUPR1O60356 82 aa10.42□□□□□ -0.74
CXXC1-210ENST00000587396 LINC00242Q5T6M2 205 aa10.42□□□□□ -0.74
CXXC1-210ENST00000587396 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
CXXC1-210ENST00000587396 TMEM18Q96B42 140 aa10.41□□□□□ -0.74
CXXC1-210ENST00000587396 TRBV30A0A0K0K1B3 111 aa10.4□□□□□ -0.74
CXXC1-210ENST00000587396 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
CXXC1-210ENST00000587396 HIGD1CA8MV81 97 aa10.4□□□□□ -0.74
CXXC1-210ENST00000587396 RPL28P46779 137 aaKnown RBP10.4□□□□□ -0.74
CXXC1-210ENST00000587396 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.74
CXXC1-210ENST00000587396 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
CXXC1-210ENST00000587396 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
CXXC1-210ENST00000587396 PACRGQ96M98 296 aaPredicted RBP10.39□□□□□ -0.75
CXXC1-210ENST00000587396 XAGE1AQ9HD64 81 aa10.39□□□□□ -0.75
CXXC1-210ENST00000587396 FAM231DQ6ZW35 169 aa10.38□□□□□ -0.75
CXXC1-210ENST00000587396 TGIF2-C20orf24A0A0A6YYL0 155 aa10.37□□□□□ -0.75
CXXC1-210ENST00000587396 BCE1O60756 84 aa10.37□□□□□ -0.75
CXXC1-210ENST00000587396 HBBP68871 147 aa10.37□□□□□ -0.75
CXXC1-210ENST00000587396 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
CXXC1-210ENST00000587396 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
CXXC1-210ENST00000587396 KRTAP4-1Q9BYQ7 146 aa10.36□□□□□ -0.75
CXXC1-210ENST00000587396 ZNF727A8MUV8 499 aa10.35□□□□□ -0.75
CXXC1-210ENST00000587396 SRSF3P84103 164 aaKnown RBP10.35□□□□□ -0.75
CXXC1-210ENST00000587396 CT83Q5H943 113 aa10.35□□□□□ -0.75
CXXC1-210ENST00000587396 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
CXXC1-210ENST00000587396 RPL37AP8A6NKH3 93 aa10.34□□□□□ -0.75
CXXC1-210ENST00000587396 PPP1R17O96001 155 aa10.34□□□□□ -0.75
CXXC1-210ENST00000587396 CEBPGP53567 150 aa10.34□□□□□ -0.75
CXXC1-210ENST00000587396 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
CXXC1-210ENST00000587396 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
CXXC1-210ENST00000587396 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
CXXC1-210ENST00000587396 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
CXXC1-210ENST00000587396 TCAPO15273 167 aa10.31□□□□□ -0.76
CXXC1-210ENST00000587396 RIGQ13278 110 aa10.31□□□□□ -0.76
CXXC1-210ENST00000587396 TOMM7Q9P0U1 55 aa10.31□□□□□ -0.76
CXXC1-210ENST00000587396 GAGE10A6NGK3 116 aa10.3□□□□□ -0.76
CXXC1-210ENST00000587396 TAGLN2P37802 199 aaKnown RBP10.29□□□□□ -0.76
CXXC1-210ENST00000587396 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
CXXC1-210ENST00000587396 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
CXXC1-210ENST00000587396 C20orf78Q9BR46 151 aa10.29□□□□□ -0.76
CXXC1-210ENST00000587396 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
CXXC1-210ENST00000587396 ZC2HC1BQ5TFG8 222 aa10.28□□□□□ -0.76
CXXC1-210ENST00000587396 SMIM2Q9BVW6 85 aa10.28□□□□□ -0.76
CXXC1-210ENST00000587396 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 PRSS2P07478 247 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 CKS2P33552 79 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 UBE2AP49459 152 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 CKS1BP61024 79 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 FAM229BQ4G0N7 80 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.77
CXXC1-210ENST00000587396 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
CXXC1-210ENST00000587396 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
CXXC1-210ENST00000587396 TMEM250H0YL14 139 aa10.26□□□□□ -0.77
CXXC1-210ENST00000587396 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
CXXC1-210ENST00000587396 KRTAP13-1Q8IUC0 172 aa10.26□□□□□ -0.77
CXXC1-210ENST00000587396 RPL32P62910 135 aaKnown RBP10.25□□□□□ -0.77
CXXC1-210ENST00000587396 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
CXXC1-210ENST00000587396 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
CXXC1-210ENST00000587396 LINC00337Q8N6G1 96 aa10.25□□□□□ -0.77
CXXC1-210ENST00000587396 BATF3Q9NR55 127 aa10.25□□□□□ -0.77
CXXC1-210ENST00000587396 V9GYV3 84 aa10.25□□□□□ -0.77
CXXC1-210ENST00000587396 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
CXXC1-210ENST00000587396 C3orf22Q8N5N4 141 aa10.24□□□□□ -0.77
CXXC1-210ENST00000587396 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
CXXC1-210ENST00000587396 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
CXXC1-210ENST00000587396 RGS21Q2M5E4 152 aa10.23□□□□□ -0.77
CXXC1-210ENST00000587396 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
CXXC1-210ENST00000587396 D6R8Y8 96 aa10.22□□□□□ -0.77
CXXC1-210ENST00000587396 NPYP01303 97 aa10.22□□□□□ -0.77
CXXC1-210ENST00000587396 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
CXXC1-210ENST00000587396 ALKBH7Q9BT30 221 aaPredicted RBP10.22□□□□□ -0.77
CXXC1-210ENST00000587396 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
CXXC1-210ENST00000587396 Q6ZN92 141 aa10.21□□□□□ -0.77
CXXC1-210ENST00000587396 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.77
CXXC1-210ENST00000587396 SCO1O75880 301 aa10.2□□□□□ -0.78
CXXC1-210ENST00000587396 PRLHP81277 87 aa10.2□□□□□ -0.78
CXXC1-210ENST00000587396 TEX43Q6ZNM6 134 aa10.2□□□□□ -0.78
CXXC1-210ENST00000587396 Q8IZM0 81 aa10.2□□□□□ -0.78
CXXC1-210ENST00000587396 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
CXXC1-210ENST00000587396 PNRC1Q12796 327 aaPredicted RBP10.19□□□□□ -0.78
CXXC1-210ENST00000587396 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms