RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
CHAF1A-203ENST00000585854 FAM19A5Q7Z5A7 132 aaPredicted RBP12.42□□□□□ -0.42
CHAF1A-203ENST00000585854 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
CHAF1A-203ENST00000585854 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
CHAF1A-203ENST00000585854 LINC00862A6NCI5 91 aa12.41□□□□□ -0.42
CHAF1A-203ENST00000585854 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
CHAF1A-203ENST00000585854 TNFRSF6BO95407 300 aa12.41□□□□□ -0.42
CHAF1A-203ENST00000585854 C10orf25Q5T742 122 aa12.41□□□□□ -0.42
CHAF1A-203ENST00000585854 TCAPO15273 167 aa12.4□□□□□ -0.42
CHAF1A-203ENST00000585854 GAGE2EQ4V326 116 aa12.4□□□□□ -0.42
CHAF1A-203ENST00000585854 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
CHAF1A-203ENST00000585854 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.42
CHAF1A-203ENST00000585854 GAGE2DQ9UEU5 116 aa12.4□□□□□ -0.42
CHAF1A-203ENST00000585854 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
CHAF1A-203ENST00000585854 D6R8Y8 96 aa12.39□□□□□ -0.43
CHAF1A-203ENST00000585854 HBBP68871 147 aa12.39□□□□□ -0.43
CHAF1A-203ENST00000585854 UNQ6190/PRO20217Q6UXQ8 127 aa12.39□□□□□ -0.43
CHAF1A-203ENST00000585854 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 SMIM27A0A1W2PRY6 76 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 F8WDY8 70 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 MRPL54Q6P161 138 aaKnown RBP12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 KRTAP11-1Q8IUC1 163 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 FAM104AQ969W3 186 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
CHAF1A-203ENST00000585854 TGIF2-C20orf24A0A0A6YYL0 155 aa12.37□□□□□ -0.43
CHAF1A-203ENST00000585854 NPYP01303 97 aa12.37□□□□□ -0.43
CHAF1A-203ENST00000585854 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
CHAF1A-203ENST00000585854 NAT8Q9UHE5 227 aa12.37□□□□□ -0.43
CHAF1A-203ENST00000585854 A0A1B0GW15 77 aa12.36□□□□□ -0.43
CHAF1A-203ENST00000585854 H0Y9J4 135 aa12.36□□□□□ -0.43
CHAF1A-203ENST00000585854 MRPS36P82909 103 aaKnown RBP12.36□□□□□ -0.43
CHAF1A-203ENST00000585854 LPAP08519 4548 aa12.36□□□□□ -0.43
CHAF1A-203ENST00000585854 F8W036 122 aa12.35□□□□□ -0.43
CHAF1A-203ENST00000585854 UBE2BP63146 152 aa12.35□□□□□ -0.43
CHAF1A-203ENST00000585854 S100A8P05109 93 aa12.34□□□□□ -0.43
CHAF1A-203ENST00000585854 TLX1NBP0CAT3 122 aa12.34□□□□□ -0.43
CHAF1A-203ENST00000585854 C9JQL5 133 aa12.33□□□□□ -0.44
CHAF1A-203ENST00000585854 M0QXV9 152 aa12.33□□□□□ -0.44
CHAF1A-203ENST00000585854 IFI27P40305 119 aaPredicted RBP12.33□□□□□ -0.44
CHAF1A-203ENST00000585854 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
CHAF1A-203ENST00000585854 RAB5AP20339 215 aa12.32□□□□□ -0.44
CHAF1A-203ENST00000585854 UBE2D1P51668 147 aa12.3□□□□□ -0.44
CHAF1A-203ENST00000585854 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
CHAF1A-203ENST00000585854 PPBPP02775 128 aa12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 KIAA0087Q14695 138 aa12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 PEA15Q15121 130 aa12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 KRTAP7-1Q8IUC3 87 aa12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
CHAF1A-203ENST00000585854 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
CHAF1A-203ENST00000585854 A0A1B0GXF2 115 aa12.28□□□□□ -0.44
CHAF1A-203ENST00000585854 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
CHAF1A-203ENST00000585854 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
CHAF1A-203ENST00000585854 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
CHAF1A-203ENST00000585854 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.45
CHAF1A-203ENST00000585854 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
CHAF1A-203ENST00000585854 TMEM136Q6ZRR5 245 aa12.27□□□□□ -0.45
CHAF1A-203ENST00000585854 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
CHAF1A-203ENST00000585854 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
CHAF1A-203ENST00000585854 NDUFC2-KCTD14E9PQ53 114 aa12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 KRTAP1-4P0C5Y4 121 aa12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 PRR4Q16378 134 aa12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 C9orf129Q5T035 196 aaKnown RBP12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 TEX43Q6ZNM6 134 aa12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
CHAF1A-203ENST00000585854 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
CHAF1A-203ENST00000585854 C2orf88Q9BSF0 95 aa12.24□□□□□ -0.45
CHAF1A-203ENST00000585854 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
CHAF1A-203ENST00000585854 PRSS2P07478 247 aa12.23□□□□□ -0.45
CHAF1A-203ENST00000585854 LINC00469Q8N7U9 141 aa12.22□□□□□ -0.45
CHAF1A-203ENST00000585854 RPL13AP40429 203 aaKnown RBP12.21□□□□□ -0.45
CHAF1A-203ENST00000585854 Q6ZN92 141 aa12.21□□□□□ -0.45
CHAF1A-203ENST00000585854 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
CHAF1A-203ENST00000585854 CKS1BP61024 79 aa12.2□□□□□ -0.46
CHAF1A-203ENST00000585854 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
CHAF1A-203ENST00000585854 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
CHAF1A-203ENST00000585854 VCX2Q9H322 139 aa12.19□□□□□ -0.46
CHAF1A-203ENST00000585854 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
CHAF1A-203ENST00000585854 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
CHAF1A-203ENST00000585854 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
CHAF1A-203ENST00000585854 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
CHAF1A-203ENST00000585854 XAGE1AQ9HD64 81 aa12.17□□□□□ -0.46
CHAF1A-203ENST00000585854 ZNF861PO60384 105 aa12.16□□□□□ -0.46
CHAF1A-203ENST00000585854 Q8N8P6 123 aa12.16□□□□□ -0.46
CHAF1A-203ENST00000585854 ALKBH7Q9BT30 221 aaPredicted RBP12.16□□□□□ -0.46
CHAF1A-203ENST00000585854 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
CHAF1A-203ENST00000585854 C22orf24Q9Y442 160 aa12.16□□□□□ -0.46
CHAF1A-203ENST00000585854 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
CHAF1A-203ENST00000585854 TSPAN13O95857 204 aa12.14□□□□□ -0.47
CHAF1A-203ENST00000585854 AMELXQ99217 191 aa12.14□□□□□ -0.47
CHAF1A-203ENST00000585854 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
CHAF1A-203ENST00000585854 NUPR1O60356 82 aa12.13□□□□□ -0.47
CHAF1A-203ENST00000585854 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
CHAF1A-203ENST00000585854 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
CHAF1A-203ENST00000585854 Q8IZM0 81 aa12.13□□□□□ -0.47
CHAF1A-203ENST00000585854 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
CHAF1A-203ENST00000585854 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
CHAF1A-203ENST00000585854 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
CHAF1A-203ENST00000585854 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
CHAF1A-203ENST00000585854 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms