RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 IGLV4-3A0A075B6K6 122 aa17.37■□□□□ 0.37
SMARCD2-210ENST00000584400 NPSP0C0P6 89 aa17.37■□□□□ 0.37
SMARCD2-210ENST00000584400 SYCNQ0VAF6 134 aa17.37■□□□□ 0.37
SMARCD2-210ENST00000584400 TEX43Q6ZNM6 134 aa17.37■□□□□ 0.37
SMARCD2-210ENST00000584400 APOC3P02656 99 aa17.36■□□□□ 0.37
SMARCD2-210ENST00000584400 SVBPQ8N300 66 aa17.36■□□□□ 0.37
SMARCD2-210ENST00000584400 C2orf88Q9BSF0 95 aa17.36■□□□□ 0.37
SMARCD2-210ENST00000584400 PANO1I0J062 215 aa17.35■□□□□ 0.37
SMARCD2-210ENST00000584400 SNAPINO95295 136 aa17.35■□□□□ 0.37
SMARCD2-210ENST00000584400 PRSS3P2Q8NHM4 247 aa17.35■□□□□ 0.37
SMARCD2-210ENST00000584400 SPACA4Q8TDM5 124 aa17.35■□□□□ 0.37
SMARCD2-210ENST00000584400 LINC00526Q96FQ7 95 aa17.35■□□□□ 0.37
SMARCD2-210ENST00000584400 IGHV3OR16-9A0A0B4J2B5 98 aa17.34■□□□□ 0.37
SMARCD2-210ENST00000584400 LINC00474Q9P2X8 69 aa17.34■□□□□ 0.37
SMARCD2-210ENST00000584400 IGLV4-69A0A075B6H9 119 aa17.33■□□□□ 0.36
SMARCD2-210ENST00000584400 TGIF2-C20orf24A0A0A6YYL0 155 aa17.33■□□□□ 0.36
SMARCD2-210ENST00000584400 PAPPA-AS1Q5QFB9 102 aa17.33■□□□□ 0.36
SMARCD2-210ENST00000584400 OR10D4PQ8NGN7 298 aa17.33■□□□□ 0.36
SMARCD2-210ENST00000584400 C2orf48Q96LS8 159 aa17.33■□□□□ 0.36
SMARCD2-210ENST00000584400 CHTF8P0CG12 524 aa17.32■□□□□ 0.36
SMARCD2-210ENST00000584400 CAMK2N2Q96S95 79 aa17.32■□□□□ 0.36
SMARCD2-210ENST00000584400 VCX2Q9H322 139 aa17.32■□□□□ 0.36
SMARCD2-210ENST00000584400 FABP9Q0Z7S8 132 aa17.31■□□□□ 0.36
SMARCD2-210ENST00000584400 ALKBH7Q9BT30 221 aaPredicted RBP17.31■□□□□ 0.36
SMARCD2-210ENST00000584400 MRPL18Q9H0U6 180 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-210ENST00000584400 A0A087WYN8 130 aa17.3■□□□□ 0.36
SMARCD2-210ENST00000584400 LINC01549A6NIU2 74 aa17.3■□□□□ 0.36
SMARCD2-210ENST00000584400 SPAG11BQ08648 103 aa17.3■□□□□ 0.36
SMARCD2-210ENST00000584400 IGKV2-24A0A0C4DH68 120 aa17.29■□□□□ 0.36
SMARCD2-210ENST00000584400 F8WDY8 70 aa17.29■□□□□ 0.36
SMARCD2-210ENST00000584400 MAJINQ3KP22 176 aa17.29■□□□□ 0.36
SMARCD2-210ENST00000584400 IGIPA6NJ69 53 aa17.28■□□□□ 0.36
SMARCD2-210ENST00000584400 RPL37AP61513 92 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-210ENST00000584400 LINC00242Q5T6M2 205 aa17.28■□□□□ 0.36
SMARCD2-210ENST00000584400 ORAOV1Q8WV07 137 aa17.28■□□□□ 0.36
SMARCD2-210ENST00000584400 TOMM6Q96B49 74 aa17.27■□□□□ 0.36
SMARCD2-210ENST00000584400 AMELXQ99217 191 aa17.27■□□□□ 0.36
SMARCD2-210ENST00000584400 TIMM17AQ99595 171 aa17.27■□□□□ 0.36
SMARCD2-210ENST00000584400 PLAC8Q9NZF1 115 aa17.27■□□□□ 0.36
SMARCD2-210ENST00000584400 UBE2D1P51668 147 aa17.26■□□□□ 0.35
SMARCD2-210ENST00000584400 A0A087WZ39 114 aa17.25■□□□□ 0.35
SMARCD2-210ENST00000584400 Q6ZRU5 148 aa17.25■□□□□ 0.35
SMARCD2-210ENST00000584400 A0A096LNI7 61 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 LOC107984640A0A0U1RRK4 108 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 SEC11AP67812 179 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 FA2HQ7L5A8 372 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 SMCO4Q9NRQ5 59 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 TRAPPC1Q9Y5R8 145 aa17.24■□□□□ 0.35
SMARCD2-210ENST00000584400 LINC01546A6NGU7 62 aa17.23■□□□□ 0.35
SMARCD2-210ENST00000584400 ERASQ7Z444 233 aa17.23■□□□□ 0.35
SMARCD2-210ENST00000584400 LINC01561Q8N1V8 128 aa17.23■□□□□ 0.35
SMARCD2-210ENST00000584400 RNF151Q2KHN1 245 aa17.22■□□□□ 0.35
SMARCD2-210ENST00000584400 STPG4Q8N801 248 aa17.22■□□□□ 0.35
SMARCD2-210ENST00000584400 C7orf33Q8WU49 177 aa17.22■□□□□ 0.35
SMARCD2-210ENST00000584400 SCGB3A1Q96QR1 104 aa17.22■□□□□ 0.35
SMARCD2-210ENST00000584400 LINC00173Q6ZV60 143 aa17.21■□□□□ 0.35
SMARCD2-210ENST00000584400 NDUFA1O15239 70 aa17.2■□□□□ 0.34
SMARCD2-210ENST00000584400 KRTAP10-4P60372 401 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-210ENST00000584400 MRPL35Q9NZE8 188 aaKnown RBP17.2■□□□□ 0.34
SMARCD2-210ENST00000584400 FAM19A3Q7Z5A8 133 aa17.19■□□□□ 0.34
SMARCD2-210ENST00000584400 PTTG1IPP53801 180 aa17.18■□□□□ 0.34
SMARCD2-210ENST00000584400 HERVK_113P63121 156 aa17.18■□□□□ 0.34
SMARCD2-210ENST00000584400 ZC2HC1BQ5TFG8 222 aa17.18■□□□□ 0.34
SMARCD2-210ENST00000584400 SRRM2Q9UQ35 2752 aaKnown RBP17.18■□□□□ 0.34
SMARCD2-210ENST00000584400 VPS13BQ7Z7G8 4022 aa17.17■□□□□ 0.34
SMARCD2-210ENST00000584400 GAGE2BQ13066 116 aa17.17■□□□□ 0.34
SMARCD2-210ENST00000584400 GEMIN7Q9H840 131 aaKnown RBP17.16■□□□□ 0.34
SMARCD2-210ENST00000584400 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.14■□□□□ 0.33
SMARCD2-210ENST00000584400 RPL18AQ02543 176 aaKnown RBP17.13■□□□□ 0.33
SMARCD2-210ENST00000584400 PRSS2P07478 247 aa17.12■□□□□ 0.33
SMARCD2-210ENST00000584400 PACRGQ96M98 296 aaPredicted RBP17.12■□□□□ 0.33
SMARCD2-210ENST00000584400 LINC00614P0C842 121 aa17.11■□□□□ 0.33
SMARCD2-210ENST00000584400 RAB5BP61020 215 aa17.11■□□□□ 0.33
SMARCD2-210ENST00000584400 KIAA0087Q14695 138 aa17.11■□□□□ 0.33
SMARCD2-210ENST00000584400 C18orf32Q8TCD1 76 aa17.11■□□□□ 0.33
SMARCD2-210ENST00000584400 A0A0J9YXV3 536 aa17.09■□□□□ 0.33
SMARCD2-210ENST00000584400 J3QL48 77 aa17.09■□□□□ 0.33
SMARCD2-210ENST00000584400 UNQ6190/PRO20217Q6UXQ8 127 aa17.09■□□□□ 0.33
SMARCD2-210ENST00000584400 TRBV30A0A0K0K1B3 111 aa17.08■□□□□ 0.32
SMARCD2-210ENST00000584400 TLX1NBP0CAT3 122 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 PMVKQ15126 192 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 C10orf25Q5T742 122 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 CST9LQ9H4G1 147 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 C6orf48Q9UBA6 75 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 CDKN2A-AS1Q9UH64 79 aa17.07■□□□□ 0.32
SMARCD2-210ENST00000584400 TINCRA0A1B0GVN0 87 aa17.06■□□□□ 0.32
SMARCD2-210ENST00000584400 KRTAP29-1A8MX34 341 aaPredicted RBP17.06■□□□□ 0.32
SMARCD2-210ENST00000584400 CKS1BP61024 79 aa17.06■□□□□ 0.32
SMARCD2-210ENST00000584400 C6orf226Q5I0X4 101 aa17.06■□□□□ 0.32
SMARCD2-210ENST00000584400 TOMM7Q9P0U1 55 aa17.06■□□□□ 0.32
SMARCD2-210ENST00000584400 Q8IZM0 81 aa17.05■□□□□ 0.32
SMARCD2-210ENST00000584400 YPEL4Q96NS1 127 aa17.05■□□□□ 0.32
SMARCD2-210ENST00000584400 HBDP02042 147 aa17.04■□□□□ 0.32
SMARCD2-210ENST00000584400 LINC00469Q8N7U9 141 aa17.04■□□□□ 0.32
SMARCD2-210ENST00000584400 OXTP01178 125 aa17.02■□□□□ 0.32
SMARCD2-210ENST00000584400 C9orf116Q5BN46 136 aaPredicted RBP17.02■□□□□ 0.32
SMARCD2-210ENST00000584400 C2orf82Q6UX34 121 aa17.02■□□□□ 0.32
SMARCD2-210ENST00000584400 FLG2Q5D862 2391 aaPredicted RBP17.01■□□□□ 0.31
SMARCD2-210ENST00000584400 URB1-AS1Q96HZ7 61 aa17.01■□□□□ 0.31
SMARCD2-210ENST00000584400 A0A1W2PNN7 141 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms