RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
CASC3-209ENST00000583902 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
CASC3-209ENST00000583902 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
CASC3-209ENST00000583902 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
CASC3-209ENST00000583902 APOMO95445 188 aa6.24□□□□□ -1.41
CASC3-209ENST00000583902 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
CASC3-209ENST00000583902 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
CASC3-209ENST00000583902 IGHV3OR16-9A0A0B4J2B5 98 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 IGHV3-30-3P0DP02 117 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 UBE2WQ96B02 151 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 VAMP8Q9BV40 100 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 TGP01266 2768 aa6.23□□□□□ -1.41
CASC3-209ENST00000583902 A0A087WZ39 114 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 A0A0J9YXV3 536 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 F8WDY8 70 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 ENHOQ6UWT2 76 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 CHCHD10Q8WYQ3 142 aaPredicted RBP6.22□□□□□ -1.41
CASC3-209ENST00000583902 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
CASC3-209ENST00000583902 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 E9PLD3 99 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 COX7A2LO14548 114 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 ZNF22P17026 224 aaPredicted RBP6.21□□□□□ -1.42
CASC3-209ENST00000583902 NMUP48645 174 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
CASC3-209ENST00000583902 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
CASC3-209ENST00000583902 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
CASC3-209ENST00000583902 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
CASC3-209ENST00000583902 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
CASC3-209ENST00000583902 CXCL5P42830 114 aa6.2□□□□□ -1.42
CASC3-209ENST00000583902 PMCHL2Q9BQD1 86 aa6.2□□□□□ -1.42
CASC3-209ENST00000583902 LINC00587B1AMM8 73 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 LEPROTO15243 131 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 DLEU1O43261 78 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 MALP21145 153 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 C12orf57Q99622 126 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
CASC3-209ENST00000583902 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 IGLV5-39A0A0G2JS06 123 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 GCSHP23434 173 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 XCL1P47992 114 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 FOXI1Q12951 378 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
CASC3-209ENST00000583902 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
CASC3-209ENST00000583902 COX6A2Q02221 97 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 CLPSL2Q6UWE3 100 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 Q6ZR54 194 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 Q8IZM0 81 aa6.17□□□□□ -1.42
CASC3-209ENST00000583902 IGHV3-64A0A075B6Q5 118 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 TSTD3H0UI37 97 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 J3QQQ9 107 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 LY6G6CO95867 125 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 PRSS2P07478 247 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 HERV-K104P63124 156 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 STPG4Q8N801 248 aa6.16□□□□□ -1.42
CASC3-209ENST00000583902 TENM2Q9NT68 2774 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 IGLV10-54A0A075B6I4 117 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
CASC3-209ENST00000583902 PSCAO43653 123 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 COX8AP10176 69 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 KRTAP26-1Q6PEX3 210 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 UQCR10Q9UDW1 63 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
CASC3-209ENST00000583902 hDV102S1A0JD36 115 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 NDUFA1O15239 70 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 SLC25A34Q6PIV7 304 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 C6orf223Q8N319 242 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 COPS9Q8WXC6 57 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 Q9HAA7 133 aa6.14□□□□□ -1.43
CASC3-209ENST00000583902 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
CASC3-209ENST00000583902 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 SPINK8P0C7L1 97 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 CKS1BP61024 79 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 CIRBPQ14011 172 aaKnown RBP6.13□□□□□ -1.43
CASC3-209ENST00000583902 COX17Q14061 63 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 C1orf134Q5TEV5 83 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms