RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 APOMO95445 188 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 TSPAN13O95857 204 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 RBMY1A1P0DJD3 496 aaKnown RBP3.21□□□□□ -1.9
PTPRM-215ENST00000583289 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 EMP1P54849 157 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.9
PTPRM-215ENST00000583289 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 ZFAND6Q6FIF0 208 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 MUSTN1Q8IVN3 82 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 C1orf158Q8N1D5 194 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 CITED2Q99967 270 aaPredicted RBP3.21□□□□□ -1.9
PTPRM-215ENST00000583289 TMEM243Q9BU79 118 aa3.21□□□□□ -1.9
PTPRM-215ENST00000583289 UTP20O75691 2785 aaKnown RBP3.21□□□□□ -1.9
PTPRM-215ENST00000583289 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
PTPRM-215ENST00000583289 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 TRAV26-1A0A087WT03 109 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 TRGV4A0A0C4DH28 118 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 NDUFA1O15239 70 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 IGHV3-33P01772 117 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 WFDC2Q14508 124 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 MIAQ16674 131 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 TEN1Q86WV5 123 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 SBSPONQ8IVN8 264 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 KIR2DL5BQ8NHK3 375 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 PPDPFLQ8WWR9 84 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 OPRPNQ99935 248 aaPredicted RBP3.2□□□□□ -1.9
PTPRM-215ENST00000583289 NAA38Q9BRA0 125 aaKnown RBP3.2□□□□□ -1.9
PTPRM-215ENST00000583289 TEX15Q9BXT5 2789 aa3.2□□□□□ -1.9
PTPRM-215ENST00000583289 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 TEX48A0A1B0GUV7 120 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 Q1RN00 199 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 C9orf66Q5T8R8 295 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 SH2D6Q7Z4S9 175 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 NOP10Q9NPE3 64 aaKnown RBP3.19□□□□□ -1.9
PTPRM-215ENST00000583289 ESM1Q9NQ30 184 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 CDC42SE2Q9NRR3 84 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
PTPRM-215ENST00000583289 SMG1Q96Q15 3661 aaKnown RBP3.19□□□□□ -1.9
PTPRM-215ENST00000583289 MAP1AP78559 2803 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-215ENST00000583289 CENPEQ02224 2701 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-215ENST00000583289 IGKV2-29A2NJV5 120 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-215ENST00000583289 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 H3BT86 120 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 LINC01547P58512 204 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-215ENST00000583289 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 C14orf177Q52M58 125 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 LINC00242Q5T6M2 205 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 Q6ZTI0 123 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 CSNK1G2-AS1Q8NCQ2 148 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 CDKN2A-AS1Q9UH64 79 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 NACAE9PAV3 2078 aa3.18□□□□□ -1.9
PTPRM-215ENST00000583289 POLQO75417 2590 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 ABCA12Q86UK0 2595 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 IGHV3-64A0A075B6Q5 118 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 TRBV6-8A0A0A6YYG3 113 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 TRAV8-3A0A0A6YYJ7 113 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 TRAV13-2A0A0B4J235 113 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 SLC25A20O43772 301 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 TCL1BO95988 128 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 ACYP1P07311 99 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 SPINK8P0C7L1 97 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 APOC4P55056 127 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 GAGE5Q13069 117 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 Q6ZUT4 128 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 ANKRD29Q8N6D5 301 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 LINC00612Q8N6U2 182 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 CARD19Q96LW7 228 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 LITAFQ99732 161 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 PRO0255Q9UI72 69 aa3.17□□□□□ -1.9
PTPRM-215ENST00000583289 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 ZFYVE26Q68DK2 2539 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 TRAV13-1A0A0B4J241 112 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 IGHV3-38A0A0C4DH36 116 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 IBA57-AS1B1ANH7 110 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 SMIM1B2RUZ4 78 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 C9JAW5 83 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 H0YGX0 51 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 SNCGO76070 127 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 GIG44P09565 113 aaPredicted RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 RPL35AP18077 110 aaKnown RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 SS18Q15532 418 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 MRPL23Q16540 153 aaKnown RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 LINC01620Q4KN68 170 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 CEMP1Q6PRD7 247 aaPredicted RBP3.16□□□□□ -1.9
PTPRM-215ENST00000583289 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 LINC00308Q8TCZ7 52 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 DEFB104AQ8WTQ1 72 aa3.16□□□□□ -1.9
PTPRM-215ENST00000583289 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms