RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CNBPP62633 177 aaKnown RBP10.61□□□□□ -0.71
RNF43-206ENST00000582293 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
RNF43-206ENST00000582293 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
RNF43-206ENST00000582293 Q6ZSA8 131 aa10.61□□□□□ -0.71
RNF43-206ENST00000582293 C5orf38Q86SI9 138 aa10.61□□□□□ -0.71
RNF43-206ENST00000582293 SCGB3A1Q96QR1 104 aa10.61□□□□□ -0.71
RNF43-206ENST00000582293 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
RNF43-206ENST00000582293 COX7A2LO14548 114 aa10.6□□□□□ -0.71
RNF43-206ENST00000582293 C9orf163Q8N9P6 203 aa10.6□□□□□ -0.71
RNF43-206ENST00000582293 VCX2Q9H322 139 aa10.6□□□□□ -0.71
RNF43-206ENST00000582293 LINC00310P59036 64 aa10.59□□□□□ -0.71
RNF43-206ENST00000582293 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
RNF43-206ENST00000582293 Q6ZN92 141 aa10.59□□□□□ -0.71
RNF43-206ENST00000582293 FAM19A3Q7Z5A8 133 aa10.59□□□□□ -0.71
RNF43-206ENST00000582293 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
RNF43-206ENST00000582293 HAMPP81172 84 aa10.58□□□□□ -0.72
RNF43-206ENST00000582293 LINC01549A6NIU2 74 aa10.57□□□□□ -0.72
RNF43-206ENST00000582293 HBDP02042 147 aa10.57□□□□□ -0.72
RNF43-206ENST00000582293 RAB5BP61020 215 aa10.57□□□□□ -0.72
RNF43-206ENST00000582293 C2orf88Q9BSF0 95 aa10.57□□□□□ -0.72
RNF43-206ENST00000582293 FAT1Q14517 4588 aa10.56□□□□□ -0.72
RNF43-206ENST00000582293 ATP6V1G1O75348 118 aa10.56□□□□□ -0.72
RNF43-206ENST00000582293 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
RNF43-206ENST00000582293 A0A087WZ39 114 aa10.55□□□□□ -0.72
RNF43-206ENST00000582293 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
RNF43-206ENST00000582293 MALP21145 153 aa10.55□□□□□ -0.72
RNF43-206ENST00000582293 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
RNF43-206ENST00000582293 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
RNF43-206ENST00000582293 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
RNF43-206ENST00000582293 IGHV3-64A0A075B6Q5 118 aa10.54□□□□□ -0.72
RNF43-206ENST00000582293 PANO1I0J062 215 aa10.54□□□□□ -0.72
RNF43-206ENST00000582293 NUPR1O60356 82 aa10.54□□□□□ -0.72
RNF43-206ENST00000582293 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
RNF43-206ENST00000582293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.53□□□□□ -0.72
RNF43-206ENST00000582293 SERF1AO75920 110 aa10.52□□□□□ -0.73
RNF43-206ENST00000582293 PMVKQ15126 192 aa10.52□□□□□ -0.73
RNF43-206ENST00000582293 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
RNF43-206ENST00000582293 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.73
RNF43-206ENST00000582293 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
RNF43-206ENST00000582293 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 S100A1P23297 94 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 SPAG11BQ08648 103 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 OR10D4PQ8NGN7 298 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 ORAOV1Q8WV07 137 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
RNF43-206ENST00000582293 IGLV5-45A0A087WSX0 123 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 APOMO95445 188 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
RNF43-206ENST00000582293 Q6ZRU5 148 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
RNF43-206ENST00000582293 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 HERVK_113P63121 156 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 SYCNQ0VAF6 134 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
RNF43-206ENST00000582293 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 C2orf48Q96LS8 159 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 KRTAP4-5Q9BYR2 181 aa10.49□□□□□ -0.73
RNF43-206ENST00000582293 HSBP1O75506 76 aa10.48□□□□□ -0.73
RNF43-206ENST00000582293 ATP5LO75964 103 aa10.48□□□□□ -0.73
RNF43-206ENST00000582293 SEC11AP67812 179 aa10.48□□□□□ -0.73
RNF43-206ENST00000582293 CHAC1Q9BUX1 264 aa10.48□□□□□ -0.73
RNF43-206ENST00000582293 ABCA13Q86UQ4 5058 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 CHTF8P0CG12 524 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 C10orf25Q5T742 122 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
RNF43-206ENST00000582293 GEMIN7Q9H840 131 aaKnown RBP10.47□□□□□ -0.73
RNF43-206ENST00000582293 Q8N1X5 172 aa10.46□□□□□ -0.73
RNF43-206ENST00000582293 IFI27L1Q96BM0 104 aa10.46□□□□□ -0.73
RNF43-206ENST00000582293 SMIM1B2RUZ4 78 aa10.45□□□□□ -0.74
RNF43-206ENST00000582293 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
RNF43-206ENST00000582293 NDUFA6P56556 154 aa10.45□□□□□ -0.74
RNF43-206ENST00000582293 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
RNF43-206ENST00000582293 LINC00469Q8N7U9 141 aa10.45□□□□□ -0.74
RNF43-206ENST00000582293 A0A096LNI7 61 aa10.44□□□□□ -0.74
RNF43-206ENST00000582293 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
RNF43-206ENST00000582293 SPACA4Q8TDM5 124 aa10.44□□□□□ -0.74
RNF43-206ENST00000582293 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
RNF43-206ENST00000582293 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
RNF43-206ENST00000582293 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
RNF43-206ENST00000582293 TRAV12-1A0A0B4J245 112 aa10.42□□□□□ -0.74
RNF43-206ENST00000582293 C11orf86A6NJI1 115 aa10.42□□□□□ -0.74
RNF43-206ENST00000582293 F8WDY8 70 aa10.42□□□□□ -0.74
RNF43-206ENST00000582293 RNF151Q2KHN1 245 aa10.42□□□□□ -0.74
RNF43-206ENST00000582293 NDUFA1O15239 70 aa10.41□□□□□ -0.74
RNF43-206ENST00000582293 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms