RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
PPP4R1-221ENST00000582240 PANO1I0J062 215 aa13.3□□□□□ -0.28
PPP4R1-221ENST00000582240 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
PPP4R1-221ENST00000582240 SCXQ7RTU7 201 aa13.3□□□□□ -0.28
PPP4R1-221ENST00000582240 C18orf32Q8TCD1 76 aa13.3□□□□□ -0.28
PPP4R1-221ENST00000582240 URB1-AS1Q96HZ7 61 aa13.3□□□□□ -0.28
PPP4R1-221ENST00000582240 LINC01546A6NGU7 62 aa13.29□□□□□ -0.28
PPP4R1-221ENST00000582240 VCX2Q9H322 139 aa13.29□□□□□ -0.28
PPP4R1-221ENST00000582240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-221ENST00000582240 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-221ENST00000582240 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
PPP4R1-221ENST00000582240 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
PPP4R1-221ENST00000582240 AMELXQ99217 191 aa13.28□□□□□ -0.28
PPP4R1-221ENST00000582240 IGLV4-69A0A075B6H9 119 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 IGHV3OR16-9A0A0B4J2B5 98 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 TRGC2P03986 189 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 UBE2D1P51668 147 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 Q6ZN92 141 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 CHAC1Q9BUX1 264 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 FAT1Q14517 4588 aa13.27□□□□□ -0.29
PPP4R1-221ENST00000582240 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
PPP4R1-221ENST00000582240 G0S2P27469 103 aa13.26□□□□□ -0.29
PPP4R1-221ENST00000582240 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
PPP4R1-221ENST00000582240 TIMM17AQ99595 171 aa13.25□□□□□ -0.29
PPP4R1-221ENST00000582240 C2orf88Q9BSF0 95 aa13.25□□□□□ -0.29
PPP4R1-221ENST00000582240 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
PPP4R1-221ENST00000582240 PMCHL1Q16048 86 aa13.24□□□□□ -0.29
PPP4R1-221ENST00000582240 Q5VSD8 79 aa13.24□□□□□ -0.29
PPP4R1-221ENST00000582240 ERASQ7Z444 233 aa13.24□□□□□ -0.29
PPP4R1-221ENST00000582240 APOMO95445 188 aa13.23□□□□□ -0.29
PPP4R1-221ENST00000582240 LINC00614P0C842 121 aa13.23□□□□□ -0.29
PPP4R1-221ENST00000582240 SYCNQ0VAF6 134 aa13.23□□□□□ -0.29
PPP4R1-221ENST00000582240 ORAOV1Q8WV07 137 aa13.23□□□□□ -0.29
PPP4R1-221ENST00000582240 CARD19Q96LW7 228 aa13.23□□□□□ -0.29
PPP4R1-221ENST00000582240 A0A096LNJ9 63 aa13.22□□□□□ -0.29
PPP4R1-221ENST00000582240 SPAG11BQ08648 103 aa13.22□□□□□ -0.29
PPP4R1-221ENST00000582240 Q6ZRU5 148 aa13.22□□□□□ -0.29
PPP4R1-221ENST00000582240 NPSP0C0P6 89 aa13.21□□□□□ -0.29
PPP4R1-221ENST00000582240 DPH3Q96FX2 82 aa13.21□□□□□ -0.29
PPP4R1-221ENST00000582240 A0A0J9YXV3 536 aa13.2□□□□□ -0.3
PPP4R1-221ENST00000582240 CAMK2N2Q96S95 79 aa13.2□□□□□ -0.3
PPP4R1-221ENST00000582240 A0A087WZ39 114 aa13.19□□□□□ -0.3
PPP4R1-221ENST00000582240 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
PPP4R1-221ENST00000582240 PAPPA-AS1Q5QFB9 102 aa13.19□□□□□ -0.3
PPP4R1-221ENST00000582240 LINC00528Q8N1L1 170 aa13.19□□□□□ -0.3
PPP4R1-221ENST00000582240 ABCA13Q86UQ4 5058 aa13.18□□□□□ -0.3
PPP4R1-221ENST00000582240 FAM229AH3BQW9 127 aa13.18□□□□□ -0.3
PPP4R1-221ENST00000582240 A0A096LNI7 61 aa13.17□□□□□ -0.3
PPP4R1-221ENST00000582240 RAB5BP61020 215 aa13.17□□□□□ -0.3
PPP4R1-221ENST00000582240 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
PPP4R1-221ENST00000582240 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
PPP4R1-221ENST00000582240 CST9LQ9H4G1 147 aa13.17□□□□□ -0.3
PPP4R1-221ENST00000582240 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
PPP4R1-221ENST00000582240 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
PPP4R1-221ENST00000582240 FAM19A3Q7Z5A8 133 aa13.16□□□□□ -0.3
PPP4R1-221ENST00000582240 HBDP02042 147 aa13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 NDUFA6P56556 154 aa13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 GEMIN7Q9H840 131 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 VPS13BQ7Z7G8 4022 aa13.15□□□□□ -0.3
PPP4R1-221ENST00000582240 A0A087WYN8 130 aa13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 LINC01549A6NIU2 74 aa13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 PDZD11Q5EBL8 140 aa13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
PPP4R1-221ENST00000582240 LINC00310P59036 64 aa13.13□□□□□ -0.31
PPP4R1-221ENST00000582240 PMVKQ15126 192 aa13.13□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HERVK_113P63121 156 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 GAGE2BQ13066 116 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
PPP4R1-221ENST00000582240 LINC01561Q8N1V8 128 aa13.11□□□□□ -0.31
PPP4R1-221ENST00000582240 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
PPP4R1-221ENST00000582240 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
PPP4R1-221ENST00000582240 NDUFA1O15239 70 aa13.1□□□□□ -0.31
PPP4R1-221ENST00000582240 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
PPP4R1-221ENST00000582240 SEC11AP67812 179 aa13.1□□□□□ -0.31
PPP4R1-221ENST00000582240 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-221ENST00000582240 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
PPP4R1-221ENST00000582240 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
PPP4R1-221ENST00000582240 STPG4Q8N801 248 aa13.09□□□□□ -0.31
PPP4R1-221ENST00000582240 C6orf48Q9UBA6 75 aa13.09□□□□□ -0.31
PPP4R1-221ENST00000582240 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms