RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 SPAG11BQ08648 103 aa13.25□□□□□ -0.29
CSNK1D-215ENST00000580784 TNXBP22105 4242 aa13.24□□□□□ -0.29
CSNK1D-215ENST00000580784 IGHV3OR16-9A0A0B4J2B5 98 aa13.24□□□□□ -0.29
CSNK1D-215ENST00000580784 A0A0J9YXV3 536 aa13.24□□□□□ -0.29
CSNK1D-215ENST00000580784 RAB5AP20339 215 aa13.24□□□□□ -0.29
CSNK1D-215ENST00000580784 A0A1W2PNN7 141 aa13.23□□□□□ -0.29
CSNK1D-215ENST00000580784 IFITM10A6NMD0 228 aa13.23□□□□□ -0.29
CSNK1D-215ENST00000580784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-215ENST00000580784 OR10D4PQ8NGN7 298 aa13.23□□□□□ -0.29
CSNK1D-215ENST00000580784 PNRC1Q12796 327 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-215ENST00000580784 ORAOV1Q8WV07 137 aa13.22□□□□□ -0.29
CSNK1D-215ENST00000580784 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
CSNK1D-215ENST00000580784 MT-ND4LP03901 98 aa13.21□□□□□ -0.29
CSNK1D-215ENST00000580784 RAB14P61106 215 aa13.21□□□□□ -0.29
CSNK1D-215ENST00000580784 ANAPC16Q96DE5 110 aa13.21□□□□□ -0.29
CSNK1D-215ENST00000580784 UBR4Q5T4S7 5183 aa13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 IFI27P40305 119 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 RPL18AQ02543 176 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 RNF151Q2KHN1 245 aa13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 Q6ZRP5 223 aa13.2□□□□□ -0.3
CSNK1D-215ENST00000580784 C9orf116Q5BN46 136 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-215ENST00000580784 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
CSNK1D-215ENST00000580784 PYGO1Q9Y3Y4 419 aa13.19□□□□□ -0.3
CSNK1D-215ENST00000580784 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1D-215ENST00000580784 SPINK6Q6UWN8 80 aa13.18□□□□□ -0.3
CSNK1D-215ENST00000580784 LAMTOR2Q9Y2Q5 125 aa13.18□□□□□ -0.3
CSNK1D-215ENST00000580784 IGLV4-3A0A075B6K6 122 aa13.17□□□□□ -0.3
CSNK1D-215ENST00000580784 C10orf25Q5T742 122 aa13.17□□□□□ -0.3
CSNK1D-215ENST00000580784 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
CSNK1D-215ENST00000580784 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-215ENST00000580784 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
CSNK1D-215ENST00000580784 LINC00242Q5T6M2 205 aa13.16□□□□□ -0.3
CSNK1D-215ENST00000580784 UNQ6190/PRO20217Q6UXQ8 127 aa13.16□□□□□ -0.3
CSNK1D-215ENST00000580784 F8WDY8 70 aa13.15□□□□□ -0.3
CSNK1D-215ENST00000580784 NDUFA1O15239 70 aa13.15□□□□□ -0.3
CSNK1D-215ENST00000580784 Q8N8P6 123 aa13.15□□□□□ -0.3
CSNK1D-215ENST00000580784 TMEM141Q96I45 108 aa13.15□□□□□ -0.3
CSNK1D-215ENST00000580784 A0A087WZ39 114 aa13.14□□□□□ -0.31
CSNK1D-215ENST00000580784 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
CSNK1D-215ENST00000580784 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
CSNK1D-215ENST00000580784 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-215ENST00000580784 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
CSNK1D-215ENST00000580784 KIAA0087Q14695 138 aa13.12□□□□□ -0.31
CSNK1D-215ENST00000580784 C2orf66Q6UXQ4 117 aa13.12□□□□□ -0.31
CSNK1D-215ENST00000580784 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
CSNK1D-215ENST00000580784 PSORS1C2Q9UIG4 136 aa13.12□□□□□ -0.31
CSNK1D-215ENST00000580784 CYSLTR1Q9Y271 337 aa13.12□□□□□ -0.31
CSNK1D-215ENST00000580784 ODF1Q14990 250 aa13.11□□□□□ -0.31
CSNK1D-215ENST00000580784 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
CSNK1D-215ENST00000580784 REG3GQ6UW15 175 aa13.11□□□□□ -0.31
CSNK1D-215ENST00000580784 UBE2D1P51668 147 aa13.1□□□□□ -0.31
CSNK1D-215ENST00000580784 FAM168BA1KXE4 195 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 MT-ND6P03923 174 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 TLX1NBP0CAT3 122 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 KRTAP10-8P60410 259 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 ORMDL2Q53FV1 153 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 LINC00173Q6ZV60 143 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 CTDSP1Q9GZU7 261 aa13.09□□□□□ -0.31
CSNK1D-215ENST00000580784 AMELXQ99217 191 aa13.08□□□□□ -0.32
CSNK1D-215ENST00000580784 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
CSNK1D-215ENST00000580784 VCX2Q9H322 139 aa13.08□□□□□ -0.32
CSNK1D-215ENST00000580784 ADCYAP1P18509 176 aa13.07□□□□□ -0.32
CSNK1D-215ENST00000580784 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
CSNK1D-215ENST00000580784 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
CSNK1D-215ENST00000580784 Q6ZN92 141 aa13.07□□□□□ -0.32
CSNK1D-215ENST00000580784 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
CSNK1D-215ENST00000580784 IGIPA6NJ69 53 aa13.06□□□□□ -0.32
CSNK1D-215ENST00000580784 K7EMI3 77 aa13.06□□□□□ -0.32
CSNK1D-215ENST00000580784 C1orf137Q5JT78 98 aa13.06□□□□□ -0.32
CSNK1D-215ENST00000580784 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-215ENST00000580784 KIAA1644Q3SXP7 199 aa13.05□□□□□ -0.32
CSNK1D-215ENST00000580784 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-215ENST00000580784 KRTAP11-1Q8IUC1 163 aa13.04□□□□□ -0.32
CSNK1D-215ENST00000580784 LINC01561Q8N1V8 128 aa13.04□□□□□ -0.32
CSNK1D-215ENST00000580784 TRBV30A0A0K0K1B3 111 aa13.03□□□□□ -0.32
CSNK1D-215ENST00000580784 TMEM218A2RU14 115 aa13.03□□□□□ -0.32
CSNK1D-215ENST00000580784 NPSP0C0P6 89 aa13.03□□□□□ -0.32
CSNK1D-215ENST00000580784 KRTAP7-1Q8IUC3 87 aa13.03□□□□□ -0.32
CSNK1D-215ENST00000580784 IFITM2Q01629 132 aa13.02□□□□□ -0.33
CSNK1D-215ENST00000580784 UQCC3Q6UW78 93 aa13.02□□□□□ -0.33
CSNK1D-215ENST00000580784 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
CSNK1D-215ENST00000580784 PACRGQ96M98 296 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-215ENST00000580784 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
CSNK1D-215ENST00000580784 TOMM7Q9P0U1 55 aa13□□□□□ -0.33
CSNK1D-215ENST00000580784 IGLV7-43P04211 117 aa12.99□□□□□ -0.33
CSNK1D-215ENST00000580784 TOMM6Q96B49 74 aa12.99□□□□□ -0.33
CSNK1D-215ENST00000580784 TRAV9-1A0A075B6T8 112 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 PRSS2P07478 247 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 G0S2P27469 103 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 C6orf226Q5I0X4 101 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 PAPPA-AS1Q5QFB9 102 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 TIMM17AQ99595 171 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
CSNK1D-215ENST00000580784 CKS1BP61024 79 aa12.97□□□□□ -0.33
CSNK1D-215ENST00000580784 M0QXV9 152 aa12.96□□□□□ -0.33
CSNK1D-215ENST00000580784 HERVK_113P63121 156 aa12.96□□□□□ -0.33
CSNK1D-215ENST00000580784 Q8IZM0 81 aa12.96□□□□□ -0.33
CSNK1D-215ENST00000580784 ALKBH7Q9BT30 221 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms