RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 COX19Q49B96 90 aa11.92□□□□□ -0.5
PPP4R1-215ENST00000580182 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
PPP4R1-215ENST00000580182 K7EMI3 77 aa11.91□□□□□ -0.5
PPP4R1-215ENST00000580182 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
PPP4R1-215ENST00000580182 TMEM141Q96I45 108 aa11.91□□□□□ -0.5
PPP4R1-215ENST00000580182 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
PPP4R1-215ENST00000580182 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
PPP4R1-215ENST00000580182 MT-ND6P03923 174 aa11.9□□□□□ -0.5
PPP4R1-215ENST00000580182 CIRBPQ14011 172 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-215ENST00000580182 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-215ENST00000580182 IGIPA6NJ69 53 aa11.89□□□□□ -0.51
PPP4R1-215ENST00000580182 LINC00173Q6ZV60 143 aa11.89□□□□□ -0.51
PPP4R1-215ENST00000580182 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
PPP4R1-215ENST00000580182 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
PPP4R1-215ENST00000580182 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
PPP4R1-215ENST00000580182 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
PPP4R1-215ENST00000580182 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
PPP4R1-215ENST00000580182 Q6ZRU5 148 aa11.87□□□□□ -0.51
PPP4R1-215ENST00000580182 TOMM6Q96B49 74 aa11.87□□□□□ -0.51
PPP4R1-215ENST00000580182 DPH3Q96FX2 82 aa11.87□□□□□ -0.51
PPP4R1-215ENST00000580182 AMELXQ99217 191 aa11.87□□□□□ -0.51
PPP4R1-215ENST00000580182 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
PPP4R1-215ENST00000580182 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
PPP4R1-215ENST00000580182 APOMO95445 188 aa11.86□□□□□ -0.51
PPP4R1-215ENST00000580182 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-215ENST00000580182 UBE2D1P51668 147 aa11.86□□□□□ -0.51
PPP4R1-215ENST00000580182 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
PPP4R1-215ENST00000580182 A0A087WYN8 130 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 A0A096LNI7 61 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 Q6ZN92 141 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 ORAOV1Q8WV07 137 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 VCX2Q9H322 139 aa11.85□□□□□ -0.51
PPP4R1-215ENST00000580182 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
PPP4R1-215ENST00000580182 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
PPP4R1-215ENST00000580182 CAMK2N2Q96S95 79 aa11.84□□□□□ -0.51
PPP4R1-215ENST00000580182 C2orf88Q9BSF0 95 aa11.84□□□□□ -0.51
PPP4R1-215ENST00000580182 NPSP0C0P6 89 aa11.83□□□□□ -0.52
PPP4R1-215ENST00000580182 G0S2P27469 103 aa11.83□□□□□ -0.52
PPP4R1-215ENST00000580182 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
PPP4R1-215ENST00000580182 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
PPP4R1-215ENST00000580182 TIMM17AQ99595 171 aa11.83□□□□□ -0.52
PPP4R1-215ENST00000580182 A0A087WZ39 114 aa11.82□□□□□ -0.52
PPP4R1-215ENST00000580182 FA2HQ7L5A8 372 aa11.82□□□□□ -0.52
PPP4R1-215ENST00000580182 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
PPP4R1-215ENST00000580182 ERASQ7Z444 233 aa11.81□□□□□ -0.52
PPP4R1-215ENST00000580182 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
PPP4R1-215ENST00000580182 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
PPP4R1-215ENST00000580182 MYCBP2O75592 4640 aa11.8□□□□□ -0.52
PPP4R1-215ENST00000580182 A0A0J9YXV3 536 aa11.8□□□□□ -0.52
PPP4R1-215ENST00000580182 CBLN2Q8IUK8 224 aa11.8□□□□□ -0.52
PPP4R1-215ENST00000580182 SMCO4Q9NRQ5 59 aa11.8□□□□□ -0.52
PPP4R1-215ENST00000580182 PLAC8Q9NZF1 115 aa11.8□□□□□ -0.52
PPP4R1-215ENST00000580182 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-215ENST00000580182 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
PPP4R1-215ENST00000580182 STPG4Q8N801 248 aa11.79□□□□□ -0.52
PPP4R1-215ENST00000580182 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 KIAA0087Q14695 138 aa11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 PAPPA-AS1Q5QFB9 102 aa11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 FLG2Q5D862 2391 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-215ENST00000580182 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.52
PPP4R1-215ENST00000580182 A0A096LNJ9 63 aa11.77□□□□□ -0.53
PPP4R1-215ENST00000580182 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.53
PPP4R1-215ENST00000580182 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.53
PPP4R1-215ENST00000580182 PTTG1IPP53801 180 aa11.76□□□□□ -0.53
PPP4R1-215ENST00000580182 PKIGQ9Y2B9 76 aa11.76□□□□□ -0.53
PPP4R1-215ENST00000580182 NDUFA1O15239 70 aa11.75□□□□□ -0.53
PPP4R1-215ENST00000580182 LINC00614P0C842 121 aa11.75□□□□□ -0.53
PPP4R1-215ENST00000580182 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
PPP4R1-215ENST00000580182 MRPL35Q9NZE8 188 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-215ENST00000580182 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
PPP4R1-215ENST00000580182 LINC01549A6NIU2 74 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 HERVK_113P63121 156 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 RPL18AQ02543 176 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 PMCHL1Q16048 86 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 RNF151Q2KHN1 245 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 C6orf48Q9UBA6 75 aa11.74□□□□□ -0.53
PPP4R1-215ENST00000580182 F8WDY8 70 aa11.73□□□□□ -0.53
PPP4R1-215ENST00000580182 HNRNPA3P51991 378 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-215ENST00000580182 CST9LQ9H4G1 147 aa11.73□□□□□ -0.53
PPP4R1-215ENST00000580182 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-215ENST00000580182 SEC11AP67812 179 aa11.72□□□□□ -0.53
PPP4R1-215ENST00000580182 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
PPP4R1-215ENST00000580182 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
PPP4R1-215ENST00000580182 A0A1W2PNN7 141 aa11.7□□□□□ -0.54
PPP4R1-215ENST00000580182 PMVKQ15126 192 aa11.7□□□□□ -0.54
PPP4R1-215ENST00000580182 HBDP02042 147 aa11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 Q6ZRP5 223 aa11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 C7orf33Q8WU49 177 aa11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 LRP1Q07954 4544 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
PPP4R1-215ENST00000580182 PRSS2P07478 247 aa11.68□□□□□ -0.54
PPP4R1-215ENST00000580182 RAB5BP61020 215 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms