RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
CSNK1D-212ENST00000580061 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
CSNK1D-212ENST00000580061 COX6A2Q02221 97 aa10.54□□□□□ -0.72
CSNK1D-212ENST00000580061 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
CSNK1D-212ENST00000580061 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
CSNK1D-212ENST00000580061 H0Y8G0 127 aa10.53□□□□□ -0.72
CSNK1D-212ENST00000580061 SEC11AP67812 179 aa10.53□□□□□ -0.72
CSNK1D-212ENST00000580061 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.73
CSNK1D-212ENST00000580061 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
CSNK1D-212ENST00000580061 IGLC3P0DOY3 106 aa10.52□□□□□ -0.73
CSNK1D-212ENST00000580061 HERVK_113P63121 156 aa10.52□□□□□ -0.73
CSNK1D-212ENST00000580061 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-212ENST00000580061 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 F8VRH5 84 aa10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 ODF1Q14990 250 aa10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-212ENST00000580061 COX7A2LO14548 114 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 TNP2Q05952 138 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
CSNK1D-212ENST00000580061 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
CSNK1D-212ENST00000580061 KRTDAPP60985 99 aa10.49□□□□□ -0.73
CSNK1D-212ENST00000580061 WFDC2Q14508 124 aa10.49□□□□□ -0.73
CSNK1D-212ENST00000580061 A0A087WTM6 91 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 A0A087WZ39 114 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 LECT2O14960 151 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 LINC00336Q6ZUF6 198 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
CSNK1D-212ENST00000580061 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
CSNK1D-212ENST00000580061 MALP21145 153 aa10.47□□□□□ -0.73
CSNK1D-212ENST00000580061 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CSNK1D-212ENST00000580061 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
CSNK1D-212ENST00000580061 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
CSNK1D-212ENST00000580061 DNAH11Q96DT5 4516 aa10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 LINC01545Q5VT33 79 aa10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.73
CSNK1D-212ENST00000580061 PKD1P98161 4303 aa10.45□□□□□ -0.74
CSNK1D-212ENST00000580061 APOMO95445 188 aa10.45□□□□□ -0.74
CSNK1D-212ENST00000580061 CFAP161Q6P656 301 aa10.45□□□□□ -0.74
CSNK1D-212ENST00000580061 IGHV3-64A0A075B6Q5 118 aa10.44□□□□□ -0.74
CSNK1D-212ENST00000580061 DPM2O94777 84 aa10.44□□□□□ -0.74
CSNK1D-212ENST00000580061 PLNP26678 52 aa10.44□□□□□ -0.74
CSNK1D-212ENST00000580061 Q8N814 137 aa10.44□□□□□ -0.74
CSNK1D-212ENST00000580061 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
CSNK1D-212ENST00000580061 H3BRM9 83 aa10.43□□□□□ -0.74
CSNK1D-212ENST00000580061 IGKCP01834 107 aa10.43□□□□□ -0.74
CSNK1D-212ENST00000580061 C14orf177Q52M58 125 aa10.43□□□□□ -0.74
CSNK1D-212ENST00000580061 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
CSNK1D-212ENST00000580061 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CSNK1D-212ENST00000580061 EREGO14944 169 aa10.42□□□□□ -0.74
CSNK1D-212ENST00000580061 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
CSNK1D-212ENST00000580061 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
CSNK1D-212ENST00000580061 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
CSNK1D-212ENST00000580061 C20orf202A1L168 122 aa10.41□□□□□ -0.74
CSNK1D-212ENST00000580061 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
CSNK1D-212ENST00000580061 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
CSNK1D-212ENST00000580061 TMEM223A0PJW6 202 aa10.4□□□□□ -0.74
CSNK1D-212ENST00000580061 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
CSNK1D-212ENST00000580061 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
CSNK1D-212ENST00000580061 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 A0A1B0GVY2 172 aa10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 KIAA0087Q14695 138 aa10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 LINC00526Q96FQ7 95 aa10.38□□□□□ -0.75
CSNK1D-212ENST00000580061 Q8IZM0 81 aa10.37□□□□□ -0.75
CSNK1D-212ENST00000580061 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
CSNK1D-212ENST00000580061 TOMM7Q9P0U1 55 aa10.37□□□□□ -0.75
CSNK1D-212ENST00000580061 SLPIP03973 132 aa10.36□□□□□ -0.75
CSNK1D-212ENST00000580061 AKR1D1P51857 326 aa10.36□□□□□ -0.75
CSNK1D-212ENST00000580061 C2orf48Q96LS8 159 aa10.36□□□□□ -0.75
CSNK1D-212ENST00000580061 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
CSNK1D-212ENST00000580061 PRSS2P07478 247 aa10.35□□□□□ -0.75
CSNK1D-212ENST00000580061 KRTAP10-2P60368 255 aa10.35□□□□□ -0.75
CSNK1D-212ENST00000580061 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
CSNK1D-212ENST00000580061 COX7B2Q8TF08 81 aa10.35□□□□□ -0.75
CSNK1D-212ENST00000580061 SCGB1D1O95968 90 aa10.34□□□□□ -0.75
CSNK1D-212ENST00000580061 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■■□ 25.2
CSNK1D-212ENST00000580061 HERVK_113P61574 105 aa10.34□□□□□ -0.75
CSNK1D-212ENST00000580061 C6orf226Q5I0X4 101 aa10.34□□□□□ -0.75
CSNK1D-212ENST00000580061 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
CSNK1D-212ENST00000580061 F8WDY8 70 aa10.33□□□□□ -0.76
CSNK1D-212ENST00000580061 STPG4Q8N801 248 aa10.33□□□□□ -0.76
CSNK1D-212ENST00000580061 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
CSNK1D-212ENST00000580061 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
CSNK1D-212ENST00000580061 PKHD1P08F94 4074 aa10.32□□□□□ -0.76
CSNK1D-212ENST00000580061 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
CSNK1D-212ENST00000580061 SYCNQ0VAF6 134 aa10.32□□□□□ -0.76
CSNK1D-212ENST00000580061 JOSD1Q15040 202 aaPredicted RBP10.32□□□□□ -0.76
CSNK1D-212ENST00000580061 Q6ZRU5 148 aa10.32□□□□□ -0.76
CSNK1D-212ENST00000580061 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms