RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PLXNB3Q9ULL4 1909 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 NBDYA0A0U1RRE5 68 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 C10orf142B7Z368 130 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 TMEM256-PLSCR3K7ERE1 68 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BKO60814 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BJP06899 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BOP23527 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BBP33778 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 CTRLP40313 264 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BDP58876 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BCP62807 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 COX6A2Q02221 97 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 EGFEM1PQ0D2K5 195 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 ZNF726P1Q15940 193 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST2H2BEQ16778 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 PIK3CD-AS1Q5SR53 167 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 ASPHD1Q5U4P2 390 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BHQ93079 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BNQ99877 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BMQ99879 126 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 SPANXCQ9NY87 97 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC00959A0A1B0GUT2 108 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 NDUFS6O75380 124 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 PRR4Q16378 134 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6Q795 121 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 Q8N2B8 174 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 DCANP1Q8TF63 244 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 C2orf48Q96LS8 159 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 SPANXB1Q9NS25 103 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 SPENQ96T58 3664 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 LOC100131303A0A0U1RQF7 123 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 RPL37AP8A6NKH3 93 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 LST1O00453 97 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 SRSF3P84103 164 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 LYPD5Q6UWN5 251 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 WFDC9Q8NEX5 89 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC00526Q96FQ7 95 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 TRBV30A0A0K0K1B3 111 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 PRYO14603 147 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 C10orf25Q5T742 122 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 COX6B2Q6YFQ2 88 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 TOMM6Q96B49 74 aa2.12□□□□□ -2.07
SMCHD1-203ENST00000577880 BPY2O14599 106 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 DAND5Q8N907 189 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 NTN5Q8WTR8 489 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 NAA38Q9BRA0 125 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 STAB1Q9NY15 2570 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 C11orf86A6NJI1 115 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 KLLNB2CW77 178 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 P0C879 139 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 BEAN1Q3B7T3 259 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 EXPH5Q8NEV8 1989 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 M0QY20 66 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 CRYGAP11844 174 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 C12orf74Q32Q52 190 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 SPTSSBQ8NFR3 76 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 CDKN2A-AS1Q9UH64 79 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 PCNX3Q9H6A9 2034 aa2.11□□□□□ -2.07
SMCHD1-203ENST00000577880 TMEM258P61165 79 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 RPL37AP61513 92 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6ZRP5 223 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 WFDC10BQ8IUB3 73 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 HIST1H2BLQ99880 126 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 RTL8CO15255 209 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 ZNF80P51504 273 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 K7EIL1 84 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 FHL2Q14192 279 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6ZVQ6 151 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 CDIP1Q9H305 208 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC00315P59091 139 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 COX17Q14061 63 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6ZSN1 163 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 CEND1Q8N111 149 aa2.1□□□□□ -2.07
SMCHD1-203ENST00000577880 EPM2AB3EWF7 344 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 H3BNG1 76 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 K7EN84 100 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 SLPIP03973 132 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 IGLC3P0DOY3 106 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 COX8AP10176 69 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 C6orf99Q4VX62 202 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 Q8IZM0 81 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 ANAPC13Q9BS18 74 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 KIAA1549Q9HCM3 1950 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 TRBV6-5A0A0K0K1A5 114 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 PRM2P04554 102 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 IGLC6P0CF74 106 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 ANKRD39Q53RE8 183 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6JHZ5 121 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 CDPF1Q6NVV7 123 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 PYGO1Q9Y3Y4 419 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 SERP1Q9Y6X1 66 aa2.09□□□□□ -2.07
SMCHD1-203ENST00000577880 IGLV4-3A0A075B6K6 122 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A1B0GV90 55 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 E9PLD3 99 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 HIST3H2BBQ8N257 126 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 TYMSOSQ8TAI1 123 aa2.09□□□□□ -2.08
SMCHD1-203ENST00000577880 PPDPFLQ8WWR9 84 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms