RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 K7EP34 96 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 K7ERJ3 54 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 IGKV1D-33P01593 117 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 IGKV1-33P01594 117 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 PRH1P02810 166 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 MT-ATP8P03928 68 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 RNASE2P10153 161 aaKnown RBP2.62□□□□□ -1.99
NUP88-213ENST00000576862 COX7CP15954 63 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 ADCYAP1P18509 176 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 NPC2P61916 151 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 KHDC3LQ587J8 217 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 PATE2Q6UY27 113 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 ATP11AUNQ6ZP68 121 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 VMO1Q7Z5L0 202 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 DYNAPQ8N1N2 210 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 SIGLECL1Q8N7X8 197 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 C10orf105Q8TEF2 133 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 CCL19Q99731 98 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 UPK3BQ9BT76 320 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 NDUFA4L2Q9NRX3 87 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 CREBBPQ92793 2442 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 HELZ2Q9BYK8 2649 aaKnown RBP2.62□□□□□ -1.99
NUP88-213ENST00000576862 COL12A1Q99715 3063 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 TRAV1-1A0A0B4J248 108 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 MUC21A0A0G2JKD1 596 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 IGLC7A0M8Q6 106 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 NPYP01303 97 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 IGHV1-69P01742 117 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 SFTA3P0C7M3 94 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 DEFA4P12838 97 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 COX6B1P14854 86 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 SLC25A16P16260 332 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 CD24P25063 80 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 FUSP35637 526 aaKnown RBP eCLIP2.61□□□□□ -1.99
NUP88-213ENST00000576862 BLCAPP62952 87 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 DEFA5Q01523 94 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 WT1-ASQ06250 92 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 MIAQ16674 131 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 DPPA3Q6W0C5 159 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 VSTM2AQ8TAG5 236 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 SMCR5Q8TEV8 140 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 MGST2Q99735 147 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 RNF5Q99942 180 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 TIMM9Q9Y5J7 89 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 HILPDAQ9Y5L2 63 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 UNC79Q9P2D8 2635 aa2.61□□□□□ -1.99
NUP88-213ENST00000576862 MED13LQ71F56 2210 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 KMT2BQ9UMN6 2715 aaPredicted RBP2.6□□□□□ -1.99
NUP88-213ENST00000576862 IGKV1OR2-108A0A075B7D4 117 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 A0A096LNT2 108 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 SLC25A20O43772 301 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 SH2D1AO60880 128 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 SNCGO76070 127 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 APELAP0DMC3 54 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 SERF2P84101 59 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 TDRG1Q3Y452 100 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 MINOS1Q5TGZ0 78 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 MIC13Q5XKP0 118 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 UNQ5815/PRO19632Q6UWF5 114 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 SBSPONQ8IVN8 264 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 Q8N6K4 173 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 C15orf53Q8NAA6 179 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 LINC00467Q9BRT7 94 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 DPH3P1Q9H4G8 78 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 NHP2Q9NX24 153 aaKnown RBP2.6□□□□□ -1.99
NUP88-213ENST00000576862 MRPL36Q9P0J6 103 aaKnown RBP2.6□□□□□ -1.99
NUP88-213ENST00000576862 MINOS1-NBL1R4GNA1 71 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 HECTD1Q9ULT8 2610 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 FBN2P35556 2912 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 ARFGEF3Q5TH69 2177 aa2.6□□□□□ -1.99
NUP88-213ENST00000576862 UTP20O75691 2785 aaKnown RBP2.59□□□□□ -1.99
NUP88-213ENST00000576862 CCDC168Q8NDH2 2452 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 TRBV24-1A0A075B6N3 115 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 CTXND1A0A1B0GTU2 59 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 A8MUU9 505 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 NDUFA3O95167 84 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 MSMBP08118 114 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 ZNF705BP0CI00 300 aaPredicted RBP2.59□□□□□ -1.99
NUP88-213ENST00000576862 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
NUP88-213ENST00000576862 ERHP84090 104 aaKnown RBP2.59□□□□□ -1.99
NUP88-213ENST00000576862 PLGLAQ15195 96 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 FP248Q71RG6 208 aaPredicted RBP2.59□□□□□ -1.99
NUP88-213ENST00000576862 TSKUQ8WUA8 353 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 SMDT1Q9H4I9 107 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 TMEM242Q9NWH2 141 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 GNG13Q9P2W3 67 aa2.59□□□□□ -1.99
NUP88-213ENST00000576862 TENM4Q6N022 2769 aa2.58□□□□□ -2
NUP88-213ENST00000576862 DSCAMO60469 2012 aa2.58□□□□□ -2
NUP88-213ENST00000576862 TACC2O95359 2948 aa2.58□□□□□ -2
NUP88-213ENST00000576862 A8MWP4 228 aa2.58□□□□□ -2
NUP88-213ENST00000576862 I3L2K1 104 aa2.58□□□□□ -2
NUP88-213ENST00000576862 K7EIM0 57 aa2.58□□□□□ -2
NUP88-213ENST00000576862 LECT2O14960 151 aa2.58□□□□□ -2
NUP88-213ENST00000576862 FXYD3Q14802 87 aa2.58□□□□□ -2
NUP88-213ENST00000576862 KIAA2026Q5HYC2 2103 aa2.58□□□□□ -2
NUP88-213ENST00000576862 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
NUP88-213ENST00000576862 SOSTDC1Q6X4U4 206 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms