RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 M0R3E3 92 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 C5orf56Q8N8D9 126 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 WFDC6Q9BQY6 131 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 HEATR1Q9H583 2144 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 NHSQ6T4R5 1651 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 ZFHX2Q9C0A1 2572 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 PAPPAQ13219 1627 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 ALKQ9UM73 1620 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 SEC16AO15027 2179 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 RP1P56715 2156 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 A0A087WTM6 91 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 IGKV2-29A2NJV5 120 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 KRTAP10-6P60371 365 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 FXYD6Q9H0Q3 95 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 CEP192Q8TEP8 1941 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 SHPRHQ149N8 1683 aa2.69□□□□□ -1.98
TOPBP1-210ENST00000572787 CICQ96RK0 1608 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 A0A1B0GUT8 65 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 IL9P15248 144 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 ZNF137PP52743 207 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 COX17Q14061 63 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 FDCSPQ8NFU4 85 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 TXNDC17Q9BRA2 123 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 PLAC8Q9NZF1 115 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 SNURFQ9Y675 71 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 MED12Q93074 2177 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 PI4KAP42356 2102 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 ARFGEF1Q9Y6D6 1849 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 IFT172Q9UG01 1749 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 LRRC7Q96NW7 1537 aa2.68□□□□□ -1.98
TOPBP1-210ENST00000572787 LOC285556D6RIA3 1793 aa2.67□□□□□ -1.98
TOPBP1-210ENST00000572787 COA5Q86WW8 74 aa2.67□□□□□ -1.98
TOPBP1-210ENST00000572787 FAM103A1Q9BTL3 118 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-210ENST00000572787 ANKRD50Q9ULJ7 1429 aa2.67□□□□□ -1.98
TOPBP1-210ENST00000572787 TNRC6BQ9UPQ9 1833 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 FXYD4P59646 89 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 LINC00304Q8N9R0 145 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 SMIM4Q8WVI0 70 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 SPRR4Q96PI1 79 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 DIP2AQ14689 1571 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 VWDEQ8N2E2 1590 aa2.66□□□□□ -1.98
TOPBP1-210ENST00000572787 NUP188Q5SRE5 1749 aa2.65□□□□□ -1.98
TOPBP1-210ENST00000572787 SPAG17Q6Q759 2223 aa2.65□□□□□ -1.98
TOPBP1-210ENST00000572787 NDUFB1O75438 58 aa2.65□□□□□ -1.99
TOPBP1-210ENST00000572787 ZNF625Q96I27 306 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-210ENST00000572787 CROCC2H7BZ55 1655 aa2.65□□□□□ -1.99
TOPBP1-210ENST00000572787 WIZO95785 1651 aa2.65□□□□□ -1.99
TOPBP1-210ENST00000572787 COL4A1P02462 1669 aa2.65□□□□□ -1.99
TOPBP1-210ENST00000572787 H0Y9P7 68 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 S100A3P33764 101 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 DEFB107AQ8IZN7 70 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 CYYR1Q96J86 154 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 PKD1L3Q7Z443 1732 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 BAZ2BQ9UIF8 2168 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 BRWD1Q9NSI6 2320 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 LRP6O75581 1613 aa2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 PHRF1Q9P1Y6 1649 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-210ENST00000572787 ESPL1Q14674 2120 aa2.63□□□□□ -1.99
TOPBP1-210ENST00000572787 IGFL1Q6UW32 110 aa2.63□□□□□ -1.99
TOPBP1-210ENST00000572787 LINC00208Q96KT6 92 aa2.63□□□□□ -1.99
TOPBP1-210ENST00000572787 ARFGEF3Q5TH69 2177 aa2.63□□□□□ -1.99
TOPBP1-210ENST00000572787 UNC13CQ8NB66 2214 aa2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 TRAV1-2A0A0B4J238 106 aa2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 HMGA1P17096 107 aaKnown RBP2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 Q96NJ1 140 aa2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 SPTBP11277 2137 aa2.62□□□□□ -1.99
TOPBP1-210ENST00000572787 COL5A1P20908 1838 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 C5P01031 1676 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 TRGV1A0A0A0MS02 117 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 IGKV4-1P06312 121 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 TMEM263Q8WUH6 116 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 KRTAP1-5Q9BYS1 174 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 PARP4Q9UKK3 1724 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 SHROOM3Q8TF72 1996 aa2.61□□□□□ -1.99
TOPBP1-210ENST00000572787 EIF2AK4Q9P2K8 1649 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 TIAM2Q8IVF5 1701 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 CPS1P31327 1500 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 TRGV2A0A075B6R0 118 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 IFI6P09912 130 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 CAV3P56539 151 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 GDF5OSQ5U4N7 250 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 NESP48681 1621 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 NHSL1Q5SYE7 1610 aa2.6□□□□□ -1.99
TOPBP1-210ENST00000572787 TSC2P49815 1807 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 LINC01549A6NIU2 74 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 Q6ZQY7 126 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 ANKRD36A6QL64 1941 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 ADAMTS9Q9P2N4 1935 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 KIAA0556O60303 1618 aa2.59□□□□□ -1.99
TOPBP1-210ENST00000572787 PCDH15Q96QU1 1955 aa2.59□□□□□ -2
TOPBP1-210ENST00000572787 MYO7BQ6PIF6 2116 aa2.59□□□□□ -2
TOPBP1-210ENST00000572787 PRRC2BQ5JSZ5 2229 aaKnown RBP2.58□□□□□ -2
TOPBP1-210ENST00000572787 ABCC6O95255 1503 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 BIVM-ERCC5R4GMW8 1640 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 ACYP2P14621 99 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 SPINK7P58062 85 aa2.58□□□□□ -2
TOPBP1-210ENST00000572787 NREPQ16612 68 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms