RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
SPG7-221ENST00000569720 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
SPG7-221ENST00000569720 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
SPG7-221ENST00000569720 SDIM1Q6ZPB5 146 aa8.43□□□□□ -1.06
SPG7-221ENST00000569720 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
SPG7-221ENST00000569720 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
SPG7-221ENST00000569720 CYSLTR1Q9Y271 337 aa8.43□□□□□ -1.06
SPG7-221ENST00000569720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
SPG7-221ENST00000569720 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
SPG7-221ENST00000569720 HSBP1O75506 76 aa8.42□□□□□ -1.06
SPG7-221ENST00000569720 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
SPG7-221ENST00000569720 TMEM101Q96IK0 257 aa8.42□□□□□ -1.06
SPG7-221ENST00000569720 IGHV3-64A0A075B6Q5 118 aa8.41□□□□□ -1.06
SPG7-221ENST00000569720 S100A6P06703 90 aa8.41□□□□□ -1.06
SPG7-221ENST00000569720 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
SPG7-221ENST00000569720 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
SPG7-221ENST00000569720 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
SPG7-221ENST00000569720 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 PANO1I0J062 215 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 CCL25O15444 150 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 HBDP02042 147 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
SPG7-221ENST00000569720 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 TMEM141Q96I45 108 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
SPG7-221ENST00000569720 ATP5LO75964 103 aa8.39□□□□□ -1.07
SPG7-221ENST00000569720 HNRNPA3P51991 378 aaKnown RBP8.39□□□□□ -1.07
SPG7-221ENST00000569720 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
SPG7-221ENST00000569720 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
SPG7-221ENST00000569720 ERASQ7Z444 233 aa8.39□□□□□ -1.07
SPG7-221ENST00000569720 SERF1AO75920 110 aa8.38□□□□□ -1.07
SPG7-221ENST00000569720 FGF6P10767 208 aa8.38□□□□□ -1.07
SPG7-221ENST00000569720 NDUFA6P56556 154 aa8.38□□□□□ -1.07
SPG7-221ENST00000569720 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
SPG7-221ENST00000569720 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
SPG7-221ENST00000569720 Q6ZN92 141 aa8.37□□□□□ -1.07
SPG7-221ENST00000569720 Q6ZRU5 148 aa8.37□□□□□ -1.07
SPG7-221ENST00000569720 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
SPG7-221ENST00000569720 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
SPG7-221ENST00000569720 IGKV3OR2-268A0A0C4DH90 116 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
SPG7-221ENST00000569720 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
SPG7-221ENST00000569720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.35□□□□□ -1.07
SPG7-221ENST00000569720 A0A087WYN8 130 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 IGKV2-29A2NJV5 120 aaPredicted RBP8.35□□□□□ -1.07
SPG7-221ENST00000569720 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 SLPIP03973 132 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 AKR1D1P51857 326 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
SPG7-221ENST00000569720 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 CHTF8P0CG12 524 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 LINC00310P59036 64 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 SEC11AP67812 179 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 VCX2Q9H322 139 aa8.34□□□□□ -1.07
SPG7-221ENST00000569720 A0A096LNJ9 63 aa8.33□□□□□ -1.08
SPG7-221ENST00000569720 S100A2P29034 98 aa8.33□□□□□ -1.08
SPG7-221ENST00000569720 RPL39P62891 51 aaKnown RBP8.33□□□□□ -1.08
SPG7-221ENST00000569720 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
SPG7-221ENST00000569720 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
SPG7-221ENST00000569720 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
SPG7-221ENST00000569720 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
SPG7-221ENST00000569720 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
SPG7-221ENST00000569720 COX6A2Q02221 97 aa8.32□□□□□ -1.08
SPG7-221ENST00000569720 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
SPG7-221ENST00000569720 IFI27L1Q96BM0 104 aa8.32□□□□□ -1.08
SPG7-221ENST00000569720 AMELXQ99217 191 aa8.32□□□□□ -1.08
SPG7-221ENST00000569720 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 NUPR1O60356 82 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 PMVKQ15126 192 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
SPG7-221ENST00000569720 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
SPG7-221ENST00000569720 IGKV2-24A0A0C4DH68 120 aa8.3□□□□□ -1.08
SPG7-221ENST00000569720 SS18Q15532 418 aa8.3□□□□□ -1.08
SPG7-221ENST00000569720 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
SPG7-221ENST00000569720 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
SPG7-221ENST00000569720 MAP1LC3CQ9BXW4 147 aa8.3□□□□□ -1.08
SPG7-221ENST00000569720 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
SPG7-221ENST00000569720 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
SPG7-221ENST00000569720 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
SPG7-221ENST00000569720 PMCHL1Q16048 86 aa8.28□□□□□ -1.08
SPG7-221ENST00000569720 STPG4Q8N801 248 aa8.28□□□□□ -1.08
SPG7-221ENST00000569720 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
SPG7-221ENST00000569720 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 XCL1P47992 114 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 FOXI1Q12951 378 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 PET117Q6UWS5 81 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 LINC00474Q9P2X8 69 aa8.27□□□□□ -1.09
SPG7-221ENST00000569720 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
SPG7-221ENST00000569720 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms