RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
GTF3C1-211ENST00000569653 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
GTF3C1-211ENST00000569653 CBLN2Q8IUK8 224 aa8.69□□□□□ -1.02
GTF3C1-211ENST00000569653 LRP2P98164 4655 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 ODF1Q14990 250 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 Q6ZRU5 148 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 Q6ZUT4 128 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
GTF3C1-211ENST00000569653 MAJINQ3KP22 176 aa8.67□□□□□ -1.02
GTF3C1-211ENST00000569653 CD164L2Q6UWJ8 174 aa8.67□□□□□ -1.02
GTF3C1-211ENST00000569653 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
GTF3C1-211ENST00000569653 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
GTF3C1-211ENST00000569653 LOC389332A0A1B0GUA5 103 aa8.66□□□□□ -1.02
GTF3C1-211ENST00000569653 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
GTF3C1-211ENST00000569653 Q8N8P6 123 aa8.66□□□□□ -1.02
GTF3C1-211ENST00000569653 MRPL18Q9H0U6 180 aaKnown RBP8.66□□□□□ -1.02
GTF3C1-211ENST00000569653 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 K7EMI3 77 aa8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 COX19Q49B96 90 aa8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 STPG4Q8N801 248 aa8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 ALKBH7Q9BT30 221 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
GTF3C1-211ENST00000569653 MT-ND6P03923 174 aa8.64□□□□□ -1.03
GTF3C1-211ENST00000569653 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
GTF3C1-211ENST00000569653 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-211ENST00000569653 COX7A2LO14548 114 aa8.63□□□□□ -1.03
GTF3C1-211ENST00000569653 MALP21145 153 aa8.63□□□□□ -1.03
GTF3C1-211ENST00000569653 FABP9Q0Z7S8 132 aa8.63□□□□□ -1.03
GTF3C1-211ENST00000569653 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
GTF3C1-211ENST00000569653 IFITM10A6NMD0 228 aa8.62□□□□□ -1.03
GTF3C1-211ENST00000569653 SCO1O75880 301 aa8.62□□□□□ -1.03
GTF3C1-211ENST00000569653 FAM104AQ969W3 186 aa8.62□□□□□ -1.03
GTF3C1-211ENST00000569653 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
GTF3C1-211ENST00000569653 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
GTF3C1-211ENST00000569653 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
GTF3C1-211ENST00000569653 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
GTF3C1-211ENST00000569653 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
GTF3C1-211ENST00000569653 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 COLCA2A8K830 154 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 APOMO95445 188 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 G0S2P27469 103 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 Q6ZN92 141 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 OPRPNQ99935 248 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-211ENST00000569653 NPSP0C0P6 89 aa8.59□□□□□ -1.03
GTF3C1-211ENST00000569653 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
GTF3C1-211ENST00000569653 TEX43Q6ZNM6 134 aa8.59□□□□□ -1.03
GTF3C1-211ENST00000569653 C2orf88Q9BSF0 95 aa8.59□□□□□ -1.03
GTF3C1-211ENST00000569653 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
GTF3C1-211ENST00000569653 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
GTF3C1-211ENST00000569653 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
GTF3C1-211ENST00000569653 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
GTF3C1-211ENST00000569653 PTTG1IPP53801 180 aa8.57□□□□□ -1.04
GTF3C1-211ENST00000569653 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
GTF3C1-211ENST00000569653 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
GTF3C1-211ENST00000569653 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
GTF3C1-211ENST00000569653 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
GTF3C1-211ENST00000569653 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
GTF3C1-211ENST00000569653 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
GTF3C1-211ENST00000569653 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 TRGC2P03986 189 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 CAMK2N2Q96S95 79 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 TIMM17AQ99595 171 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 VCX2Q9H322 139 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
GTF3C1-211ENST00000569653 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 ATP6V1G1O75348 118 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 UBE2D1P51668 147 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 ORAOV1Q8WV07 137 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 AMELXQ99217 191 aa8.54□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
GTF3C1-211ENST00000569653 LINC00173Q6ZV60 143 aa8.53□□□□□ -1.04
GTF3C1-211ENST00000569653 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
GTF3C1-211ENST00000569653 A0A087WZ39 114 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 A0A096LNJ9 63 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 F8WDY8 70 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 ERASQ7Z444 233 aa8.52□□□□□ -1.05
GTF3C1-211ENST00000569653 LINC00614P0C842 121 aa8.51□□□□□ -1.05
GTF3C1-211ENST00000569653 SEC11AP67812 179 aa8.51□□□□□ -1.05
GTF3C1-211ENST00000569653 C10orf25Q5T742 122 aa8.51□□□□□ -1.05
GTF3C1-211ENST00000569653 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
GTF3C1-211ENST00000569653 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms