RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ORMDL2Q53FV1 153 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC01561Q8N1V8 128 aa5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 NXT2Q9NPJ8 142 aaKnown RBP5.18□□□□□ -1.58
HDGFL3-205ENST00000568129 A0A087WZ39 114 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 LOC389332A0A1B0GUA5 103 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 ZNF561-AS1K7EIQ3 104 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 CHTF8P0CG12 524 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 G0S2P27469 103 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 SYCNQ0VAF6 134 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC00242Q5T6M2 205 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 C2orf66Q6UXQ4 117 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 OR10D4PQ8NGN7 298 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 TMEM141Q96I45 108 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 ALKBH7Q9BT30 221 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 CYSLTR1Q9Y271 337 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
HDGFL3-205ENST00000568129 IGLV4-69A0A075B6H9 119 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 APOMO95445 188 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 S100PP25815 95 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 UBE2D1P51668 147 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 C5orf38Q86SI9 138 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 TOMM6Q96B49 74 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC00526Q96FQ7 95 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 CARD19Q96LW7 228 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 LINC00474Q9P2X8 69 aa5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 LRP1Q07954 4544 aaKnown RBP5.16□□□□□ -1.58
HDGFL3-205ENST00000568129 A0A096LNI7 61 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 LINC01549A6NIU2 74 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 MT-ND6P03923 174 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 MALP21145 153 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 KIAA0087Q14695 138 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 KIAA1644Q3SXP7 199 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 Q6ZRU5 148 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 TIMM17AQ99595 171 aa5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 MRPL35Q9NZE8 188 aaKnown RBP5.15□□□□□ -1.59
HDGFL3-205ENST00000568129 DMBT1Q9UGM3 2413 aaPredicted RBP5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 TLX1NBP0CAT3 122 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 PTTG1IPP53801 180 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 RPL37AP61513 92 aaKnown RBP5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 TEX43Q6ZNM6 134 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 RPS10P5Q9NQ39 176 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 HERC1Q15751 4861 aa5.14□□□□□ -1.59
HDGFL3-205ENST00000568129 LOC107984640A0A0U1RRK4 108 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 OXTP01178 125 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 HNRNPA3P51991 378 aaKnown RBP5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 MAJINQ3KP22 176 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 PAPPA-AS1Q5QFB9 102 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 ERASQ7Z444 233 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 STPG4Q8N801 248 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 YPEL4Q96NS1 127 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 CAMK2N2Q96S95 79 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 MRPL18Q9H0U6 180 aaKnown RBP5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 VCX2Q9H322 139 aa5.13□□□□□ -1.59
HDGFL3-205ENST00000568129 TNXBP22105 4242 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 TGIF2-C20orf24A0A0A6YYL0 155 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 SNAPINO95295 136 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 SEC11AP67812 179 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 SPAG11BQ08648 103 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 ZC2HC1BQ5TFG8 222 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 SVBPQ8N300 66 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 ORAOV1Q8WV07 137 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 C2orf88Q9BSF0 95 aa5.12□□□□□ -1.59
HDGFL3-205ENST00000568129 IGLV5-45A0A087WSX0 123 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 NDUFA1O15239 70 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 APOC3P02656 99 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 FABP9Q0Z7S8 132 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 ODF1Q14990 250 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 Q6ZN92 141 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 DPH3Q96FX2 82 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 URB1-AS1Q96HZ7 61 aa5.11□□□□□ -1.59
HDGFL3-205ENST00000568129 A0A096LNJ9 63 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 TRBV30A0A0K0K1B3 111 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 A0A1W2PNN7 141 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 HERVK_113P63121 156 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 C18orf32Q8TCD1 76 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 SCGB3A1Q96QR1 104 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
HDGFL3-205ENST00000568129 A0A0J9YXV3 536 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 SRSF9Q13242 221 aaKnown RBP eCLIP5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 NDUFA5Q16718 116 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 Q6ZRP5 223 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 Q8IZM0 81 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 C7orf33Q8WU49 177 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 CST9LQ9H4G1 147 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 CDKN2A-AS1Q9UH64 79 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 TRAPPC1Q9Y5R8 145 aa5.09□□□□□ -1.59
HDGFL3-205ENST00000568129 LINC00614P0C842 121 aa5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 PRR3P79522 188 aaKnown RBP5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 C9orf116Q5BN46 136 aaPredicted RBP5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 PDZD11Q5EBL8 140 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms