RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.78
CDH1-209ENST00000566510 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 WFDC10AQ9H1F0 79 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 LOC100131303A0A0U1RQF7 123 aa10.14□□□□□ -0.79
CDH1-209ENST00000566510 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
CDH1-209ENST00000566510 BBC3Q96PG8 261 aaPredicted RBP10.14□□□□□ -0.79
CDH1-209ENST00000566510 TRAV25A0A0B4J276 109 aa10.14□□□□□ -0.79
CDH1-209ENST00000566510 IL17DQ8TAD2 202 aa10.14□□□□□ -0.79
CDH1-209ENST00000566510 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
CDH1-209ENST00000566510 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
CDH1-209ENST00000566510 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
CDH1-209ENST00000566510 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
CDH1-209ENST00000566510 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
CDH1-209ENST00000566510 PLA2G2AP14555 144 aa10.12□□□□□ -0.79
CDH1-209ENST00000566510 F5H768 121 aa10.12□□□□□ -0.79
CDH1-209ENST00000566510 COX7A2LO14548 114 aa10.12□□□□□ -0.79
CDH1-209ENST00000566510 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
CDH1-209ENST00000566510 TRGV4A0A0C4DH28 118 aa10.11□□□□□ -0.79
CDH1-209ENST00000566510 GAGE6Q13070 117 aa10.11□□□□□ -0.79
CDH1-209ENST00000566510 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
CDH1-209ENST00000566510 B5MCH6 92 aa10.1□□□□□ -0.79
CDH1-209ENST00000566510 HERV-K104P63124 156 aa10.1□□□□□ -0.79
CDH1-209ENST00000566510 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
CDH1-209ENST00000566510 WFDC11Q8NEX6 87 aa10.1□□□□□ -0.79
CDH1-209ENST00000566510 ESM1Q9NQ30 184 aa10.1□□□□□ -0.79
CDH1-209ENST00000566510 SHISA2Q6UWI4 295 aa10.09□□□□□ -0.79
CDH1-209ENST00000566510 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
CDH1-209ENST00000566510 GIG44P09565 113 aaPredicted RBP10.08□□□□□ -0.8
CDH1-209ENST00000566510 TMEM86BQ8N661 226 aa10.08□□□□□ -0.8
CDH1-209ENST00000566510 C16orf74Q96GX8 76 aa10.08□□□□□ -0.8
CDH1-209ENST00000566510 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
CDH1-209ENST00000566510 ZNF843Q8N446 348 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 COX7B2Q8TF08 81 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 CHCHD5Q9BSY4 110 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 LINC00158P58513 81 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
CDH1-209ENST00000566510 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 PLAC8L1A1L4L8 177 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 Q6Q795 121 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 Q9HAA7 133 aa10.06□□□□□ -0.8
CDH1-209ENST00000566510 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
CDH1-209ENST00000566510 CRPP02741 224 aa10.05□□□□□ -0.8
CDH1-209ENST00000566510 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
CDH1-209ENST00000566510 GCN1Q92616 2671 aaKnown RBP10.05□□□□□ -0.8
CDH1-209ENST00000566510 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
CDH1-209ENST00000566510 NBEAL2Q6ZNJ1 2754 aa10.05□□□□□ -0.8
CDH1-209ENST00000566510 HIST2H2BCQ6DN03 193 aa10.04□□□□□ -0.8
CDH1-209ENST00000566510 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
CDH1-209ENST00000566510 PFN2P35080 140 aa10.04□□□□□ -0.8
CDH1-209ENST00000566510 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
CDH1-209ENST00000566510 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
CDH1-209ENST00000566510 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 TRACP01848 142 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
CDH1-209ENST00000566510 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.8
CDH1-209ENST00000566510 MRPL23Q16540 153 aaKnown RBP10.02□□□□□ -0.8
CDH1-209ENST00000566510 CMC4P56277 68 aaPredicted RBP10.01□□□□□ -0.81
CDH1-209ENST00000566510 IGKV2-28A0A075B6P5 120 aa10□□□□□ -0.81
CDH1-209ENST00000566510 IGKV2D-28P01615 120 aa10□□□□□ -0.81
CDH1-209ENST00000566510 FHL2Q14192 279 aa10□□□□□ -0.81
CDH1-209ENST00000566510 ACYP1P07311 99 aa10□□□□□ -0.81
CDH1-209ENST00000566510 DNAL4O96015 105 aa10□□□□□ -0.81
CDH1-209ENST00000566510 IGLV1-51P01701 117 aa10□□□□□ -0.81
CDH1-209ENST00000566510 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
CDH1-209ENST00000566510 PF4P02776 101 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 GAGE2AQ6NT46 116 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 OR13C6PQ8NH95 151 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 OVOL2Q9BRP0 275 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 PAX4O43316 350 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
CDH1-209ENST00000566510 CCL18P55774 89 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 SMIM11BQ8TCY0 68 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 SMCR5Q8TEV8 140 aa9.99□□□□□ -0.81
CDH1-209ENST00000566510 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
CDH1-209ENST00000566510 ATP5G1P05496 136 aa9.98□□□□□ -0.81
CDH1-209ENST00000566510 MALP21145 153 aa9.98□□□□□ -0.81
CDH1-209ENST00000566510 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
CDH1-209ENST00000566510 A0A087WYN8 130 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 A0A096LPF7 62 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 XCL1P47992 114 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 ITPR2Q14571 2701 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 FAM236AA0A1B0GUQ0 79 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 FAM236BA0A1B0GV22 79 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
CDH1-209ENST00000566510 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.81
CDH1-209ENST00000566510 A0A087WZ39 114 aa9.96□□□□□ -0.82
CDH1-209ENST00000566510 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
CDH1-209ENST00000566510 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
CDH1-209ENST00000566510 GYPEP15421 78 aa9.95□□□□□ -0.82
CDH1-209ENST00000566510 INAFM2P0DMQ5 153 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms