RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
ABCA3-204ENST00000566200 FAM168BA1KXE4 195 aa11.45□□□□□ -0.58
ABCA3-204ENST00000566200 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
ABCA3-204ENST00000566200 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
ABCA3-204ENST00000566200 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
ABCA3-204ENST00000566200 TNFRSF6BO95407 300 aa11.44□□□□□ -0.58
ABCA3-204ENST00000566200 CKS2P33552 79 aa11.44□□□□□ -0.58
ABCA3-204ENST00000566200 ADIRFQ15847 76 aa11.44□□□□□ -0.58
ABCA3-204ENST00000566200 SMIM2Q9BVW6 85 aa11.44□□□□□ -0.58
ABCA3-204ENST00000566200 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 MRPS36P82909 103 aaKnown RBP11.42□□□□□ -0.58
ABCA3-204ENST00000566200 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 SPANXA1Q9NS26 97 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 NAT8Q9UHE5 227 aa11.42□□□□□ -0.58
ABCA3-204ENST00000566200 D6R8Y8 96 aa11.41□□□□□ -0.58
ABCA3-204ENST00000566200 F8WDY8 70 aa11.41□□□□□ -0.58
ABCA3-204ENST00000566200 NPYP01303 97 aa11.41□□□□□ -0.58
ABCA3-204ENST00000566200 TLX1NBP0CAT3 122 aa11.41□□□□□ -0.58
ABCA3-204ENST00000566200 SRSF3P84103 164 aaKnown RBP11.41□□□□□ -0.58
ABCA3-204ENST00000566200 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
ABCA3-204ENST00000566200 A0A1B0GW15 77 aa11.4□□□□□ -0.58
ABCA3-204ENST00000566200 NDUFA1O15239 70 aa11.4□□□□□ -0.58
ABCA3-204ENST00000566200 TCAPO15273 167 aa11.4□□□□□ -0.58
ABCA3-204ENST00000566200 IMMP2LQ96T52 175 aa11.4□□□□□ -0.58
ABCA3-204ENST00000566200 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
ABCA3-204ENST00000566200 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
ABCA3-204ENST00000566200 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
ABCA3-204ENST00000566200 A0A087WZ39 114 aa11.38□□□□□ -0.59
ABCA3-204ENST00000566200 IFITM10A6NMD0 228 aa11.38□□□□□ -0.59
ABCA3-204ENST00000566200 HBBP68871 147 aa11.38□□□□□ -0.59
ABCA3-204ENST00000566200 FAM19A5Q7Z5A7 132 aaPredicted RBP11.38□□□□□ -0.59
ABCA3-204ENST00000566200 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
ABCA3-204ENST00000566200 H0Y9J4 135 aa11.37□□□□□ -0.59
ABCA3-204ENST00000566200 SMDT1Q9H4I9 107 aa11.37□□□□□ -0.59
ABCA3-204ENST00000566200 KRTAP1-4P0C5Y4 121 aa11.36□□□□□ -0.59
ABCA3-204ENST00000566200 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
ABCA3-204ENST00000566200 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
ABCA3-204ENST00000566200 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
ABCA3-204ENST00000566200 F8W036 122 aa11.34□□□□□ -0.59
ABCA3-204ENST00000566200 IGLV4-3A0A075B6K6 122 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 TGIF2-C20orf24A0A0A6YYL0 155 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 PPBPP02775 128 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 S100A8P05109 93 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
ABCA3-204ENST00000566200 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
ABCA3-204ENST00000566200 M0QXV9 152 aa11.31□□□□□ -0.6
ABCA3-204ENST00000566200 PEA15Q15121 130 aa11.31□□□□□ -0.6
ABCA3-204ENST00000566200 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
ABCA3-204ENST00000566200 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
ABCA3-204ENST00000566200 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
ABCA3-204ENST00000566200 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
ABCA3-204ENST00000566200 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 RAB5AP20339 215 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 UBE2D1P51668 147 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 TMEM141Q96I45 108 aa11.29□□□□□ -0.6
ABCA3-204ENST00000566200 IGLV1-50A0A075B6I6 118 aa11.28□□□□□ -0.6
ABCA3-204ENST00000566200 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
ABCA3-204ENST00000566200 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
ABCA3-204ENST00000566200 UBE2BP63146 152 aa11.27□□□□□ -0.61
ABCA3-204ENST00000566200 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
ABCA3-204ENST00000566200 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
ABCA3-204ENST00000566200 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
ABCA3-204ENST00000566200 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
ABCA3-204ENST00000566200 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
ABCA3-204ENST00000566200 PACRGQ96M98 296 aaPredicted RBP11.24□□□□□ -0.61
ABCA3-204ENST00000566200 AMELXQ99217 191 aa11.24□□□□□ -0.61
ABCA3-204ENST00000566200 C2orf66Q6UXQ4 117 aa11.23□□□□□ -0.61
ABCA3-204ENST00000566200 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
ABCA3-204ENST00000566200 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
ABCA3-204ENST00000566200 MUC2Q02817 5179 aa11.22□□□□□ -0.61
ABCA3-204ENST00000566200 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
ABCA3-204ENST00000566200 Q8N8P6 123 aa11.21□□□□□ -0.61
ABCA3-204ENST00000566200 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.61
ABCA3-204ENST00000566200 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.61
ABCA3-204ENST00000566200 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
ABCA3-204ENST00000566200 Q6ZN92 141 aa11.2□□□□□ -0.62
ABCA3-204ENST00000566200 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
ABCA3-204ENST00000566200 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
ABCA3-204ENST00000566200 ZNF861PO60384 105 aa11.19□□□□□ -0.62
ABCA3-204ENST00000566200 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
ABCA3-204ENST00000566200 VCX2Q9H322 139 aa11.19□□□□□ -0.62
ABCA3-204ENST00000566200 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
ABCA3-204ENST00000566200 C22orf24Q9Y442 160 aa11.19□□□□□ -0.62
ABCA3-204ENST00000566200 Q8IZM0 81 aa11.18□□□□□ -0.62
ABCA3-204ENST00000566200 PRSS2P07478 247 aa11.17□□□□□ -0.62
ABCA3-204ENST00000566200 CKS1BP61024 79 aa11.17□□□□□ -0.62
ABCA3-204ENST00000566200 PRR4Q16378 134 aa11.17□□□□□ -0.62
ABCA3-204ENST00000566200 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
ABCA3-204ENST00000566200 NPSP0C0P6 89 aa11.16□□□□□ -0.62
ABCA3-204ENST00000566200 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
ABCA3-204ENST00000566200 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
ABCA3-204ENST00000566200 CDKN2A-AS1Q9UH64 79 aa11.16□□□□□ -0.62
ABCA3-204ENST00000566200 ORMDL2Q53FV1 153 aa11.15□□□□□ -0.62
ABCA3-204ENST00000566200 NUPR1O60356 82 aa11.14□□□□□ -0.63
ABCA3-204ENST00000566200 CTDSP1Q9GZU7 261 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms