RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
SF3B3-207ENST00000566095 LINC00588Q9Y4M8 146 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 COL7A1Q02388 2944 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 TRAV8-3A0A0A6YYJ7 113 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 GCSHP23434 173 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 MIAQ16674 131 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 TMEM170BQ5T4T1 132 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 Q6ZVH6 145 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 WFDC10BQ8IUB3 73 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 COX11Q9Y6N1 276 aa6.72□□□□□ -1.33
SF3B3-207ENST00000566095 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 A0A0J9YXV3 536 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 MYMXA0A1B0GTQ4 84 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGHV3-30P01768 117 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGHV3-33P01772 117 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGHV3-30-3P0DP02 117 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGHV3-30-5P0DP03 117 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 REG3AQ06141 175 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 LINC00242Q5T6M2 205 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 Q9H8V8 135 aa6.71□□□□□ -1.34
SF3B3-207ENST00000566095 IGLV4-60A0A075B6I1 120 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 J3QQQ9 107 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 HSD52Q0P140 79 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-207ENST00000566095 SPANXB1Q9NS25 103 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-207ENST00000566095 PRR34Q9NV39 138 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
SF3B3-207ENST00000566095 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 A0A0J9YXY3 114 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 LINC00959A0A1B0GUT2 108 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 TIMM17BO60830 172 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 CASC10Q5T4H9 136 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 C2orf91Q6ZV80 131 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 UBE2WQ96B02 151 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
SF3B3-207ENST00000566095 A0A087WZ39 114 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 APOMO95445 188 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
SF3B3-207ENST00000566095 HERV-K104P63124 156 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 CTAG1AP78358 180 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 RNASE13Q5GAN3 156 aaKnown RBP6.68□□□□□ -1.34
SF3B3-207ENST00000566095 COL5A1-AS1Q5SY13 56 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
SF3B3-207ENST00000566095 IBA57-AS1B1ANH7 110 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 PTTG1IPP53801 180 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 SNHG12Q9BXW3 62 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
SF3B3-207ENST00000566095 ZNF815PA8K554 130 aa6.66□□□□□ -1.34
SF3B3-207ENST00000566095 COX7A2LO14548 114 aa6.66□□□□□ -1.34
SF3B3-207ENST00000566095 MALP21145 153 aa6.66□□□□□ -1.34
SF3B3-207ENST00000566095 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
SF3B3-207ENST00000566095 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-207ENST00000566095 TMEM238LA0A1B0GVL6 79 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 A6NDN8 102 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 A6NJY4 79 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 TMEM238C9JI98 176 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 F8WDY8 70 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 NDUFA1O15239 70 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 CXCL5P42830 114 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 XCL1P47992 114 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 CLPSL2Q6UWE3 100 aa6.65□□□□□ -1.34
SF3B3-207ENST00000566095 IGKV2D-24A0A075B6R9 120 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 NBDYA0A0U1RRE5 68 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 PRSS2P07478 247 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 IFITM1P13164 125 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
SF3B3-207ENST00000566095 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 ORAOV1Q8WV07 137 aa6.64□□□□□ -1.35
SF3B3-207ENST00000566095 PSCAO43653 123 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 LY6G6CO95867 125 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 Q8IZM0 81 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 MAPKAPK5-AS1Q8N8E1 139 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 LINC00476Q8WZB0 136 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 NDUFA12Q9UI09 145 aa6.63□□□□□ -1.35
SF3B3-207ENST00000566095 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 GAGE12HA6NDE8 117 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 COX6A2Q02221 97 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 CEND1Q8N111 149 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 SPANXDQ9BXN6 97 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 Q9HAA7 133 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 SPANXCQ9NY87 97 aa6.62□□□□□ -1.35
SF3B3-207ENST00000566095 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
SF3B3-207ENST00000566095 C14orf177Q52M58 125 aa6.61□□□□□ -1.35
SF3B3-207ENST00000566095 Q8N3U1 123 aa6.61□□□□□ -1.35
SF3B3-207ENST00000566095 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-207ENST00000566095 TGP01266 2768 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms