RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 IGHV1OR15-1A0A075B7D0 117 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 CRYGAP11844 174 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 KHDC1LQ5JSQ8 128 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 CHCHD7Q9BUK0 85 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 C14orf132Q9NPU4 83 aa11.76□□□□□ -0.53
LINC00554-201ENST00000564841 PYGO1Q9Y3Y4 419 aa11.75□□□□□ -0.53
LINC00554-201ENST00000564841 AKAP9Q99996 3911 aa11.75□□□□□ -0.53
LINC00554-201ENST00000564841 TRACP01848 142 aa11.75□□□□□ -0.53
LINC00554-201ENST00000564841 HRCT1Q6UXD1 115 aa11.75□□□□□ -0.53
LINC00554-201ENST00000564841 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
LINC00554-201ENST00000564841 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
LINC00554-201ENST00000564841 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
LINC00554-201ENST00000564841 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
LINC00554-201ENST00000564841 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
LINC00554-201ENST00000564841 HIVEP2P31629 2446 aa11.73□□□□□ -0.53
LINC00554-201ENST00000564841 FN1P02751 2386 aaKnown RBP11.73□□□□□ -0.53
LINC00554-201ENST00000564841 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
LINC00554-201ENST00000564841 KMT2BQ9UMN6 2715 aaPredicted RBP11.72□□□□□ -0.53
LINC00554-201ENST00000564841 NDUFA1O15239 70 aa11.72□□□□□ -0.53
LINC00554-201ENST00000564841 HIST1H4AP62805 103 aaKnown RBP11.72□□□□□ -0.53
LINC00554-201ENST00000564841 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
LINC00554-201ENST00000564841 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
LINC00554-201ENST00000564841 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
LINC00554-201ENST00000564841 CXCL5P42830 114 aa11.71□□□□□ -0.54
LINC00554-201ENST00000564841 ATOX1O00244 68 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 PDZD2O15018 2839 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 ATP5G1P05496 136 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 MALP21145 153 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 RPL18AQ02543 176 aaKnown RBP11.7□□□□□ -0.54
LINC00554-201ENST00000564841 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 WFDC9Q8NEX5 89 aa11.7□□□□□ -0.54
LINC00554-201ENST00000564841 A0A087WYN8 130 aa11.69□□□□□ -0.54
LINC00554-201ENST00000564841 USMG5Q96IX5 58 aa11.69□□□□□ -0.54
LINC00554-201ENST00000564841 TIMM17BO60830 172 aa11.69□□□□□ -0.54
LINC00554-201ENST00000564841 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
LINC00554-201ENST00000564841 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
LINC00554-201ENST00000564841 IGHV3OR16-12A0A075B7B8 117 aa11.68□□□□□ -0.54
LINC00554-201ENST00000564841 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
LINC00554-201ENST00000564841 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
LINC00554-201ENST00000564841 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
LINC00554-201ENST00000564841 J3QKU1 62 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 DNAL4O96015 105 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 SLPIP03973 132 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 HILS1P60008 231 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 J3QLI3 93 aa11.67□□□□□ -0.54
LINC00554-201ENST00000564841 RPS28P62857 69 aaKnown RBP11.67□□□□□ -0.54
LINC00554-201ENST00000564841 SETXQ7Z333 2677 aaKnown RBP11.66□□□□□ -0.54
LINC00554-201ENST00000564841 NCR3O14931 201 aa11.66□□□□□ -0.54
LINC00554-201ENST00000564841 LINC00242Q5T6M2 205 aa11.66□□□□□ -0.54
LINC00554-201ENST00000564841 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
LINC00554-201ENST00000564841 Q6YL49 198 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 PSMB8P28062 276 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 Q5XG85 94 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 LINC00337Q8N6G1 96 aa11.65□□□□□ -0.54
LINC00554-201ENST00000564841 USP17L23D6RBM5 183 aa11.65□□□□□ -0.55
LINC00554-201ENST00000564841 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
LINC00554-201ENST00000564841 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 SMIM1B2RUZ4 78 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 FHL2Q14192 279 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 F5H768 121 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 CFHR3Q02985 330 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
LINC00554-201ENST00000564841 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
LINC00554-201ENST00000564841 SLURP1P55000 103 aa11.62□□□□□ -0.55
LINC00554-201ENST00000564841 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
LINC00554-201ENST00000564841 H3BUA1 57 aa11.61□□□□□ -0.55
LINC00554-201ENST00000564841 TMEM258P61165 79 aa11.61□□□□□ -0.55
LINC00554-201ENST00000564841 SMR3AQ99954 134 aa11.61□□□□□ -0.55
LINC00554-201ENST00000564841 IGKV2-28A0A075B6P5 120 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 IGKV2D-28P01615 120 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 FAM222AQ5U5X8 452 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 DEFB131AP59861 70 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 SMIM11BQ8TCY0 68 aa11.6□□□□□ -0.55
LINC00554-201ENST00000564841 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
LINC00554-201ENST00000564841 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
LINC00554-201ENST00000564841 K7EQG2 157 aa11.59□□□□□ -0.55
LINC00554-201ENST00000564841 LECT2O14960 151 aa11.59□□□□□ -0.55
LINC00554-201ENST00000564841 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
LINC00554-201ENST00000564841 WIPF1O43516 503 aa11.58□□□□□ -0.56
LINC00554-201ENST00000564841 TOMM7Q9P0U1 55 aa11.58□□□□□ -0.56
LINC00554-201ENST00000564841 FSHBP01225 129 aa11.57□□□□□ -0.56
LINC00554-201ENST00000564841 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
LINC00554-201ENST00000564841 CRPP02741 224 aa11.57□□□□□ -0.56
LINC00554-201ENST00000564841 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
LINC00554-201ENST00000564841 NBEAL2Q6ZNJ1 2754 aa11.57□□□□□ -0.56
LINC00554-201ENST00000564841 FAM19A1Q7Z5A9 133 aa11.56□□□□□ -0.56
LINC00554-201ENST00000564841 Q6JHZ5 121 aa11.56□□□□□ -0.56
LINC00554-201ENST00000564841 TEP1Q99973 2627 aaKnown RBP11.56□□□□□ -0.56
LINC00554-201ENST00000564841 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
LINC00554-201ENST00000564841 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
LINC00554-201ENST00000564841 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
LINC00554-201ENST00000564841 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
LINC00554-201ENST00000564841 DNAJC9-AS1A6NH13 148 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms