RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
NME3-207ENST00000564628 C2orf66Q6UXQ4 117 aa12.38□□□□□ -0.43
NME3-207ENST00000564628 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
NME3-207ENST00000564628 IFITM10A6NMD0 228 aa12.37□□□□□ -0.43
NME3-207ENST00000564628 ATP5LO75964 103 aa12.37□□□□□ -0.43
NME3-207ENST00000564628 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
NME3-207ENST00000564628 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
NME3-207ENST00000564628 TRAV8-4A0A0B4J246 113 aa12.36□□□□□ -0.43
NME3-207ENST00000564628 AMMECR1LQ6DCA0 310 aa12.36□□□□□ -0.43
NME3-207ENST00000564628 A0A096LNJ9 63 aa12.35□□□□□ -0.43
NME3-207ENST00000564628 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
NME3-207ENST00000564628 OR10D4PQ8NGN7 298 aa12.35□□□□□ -0.43
NME3-207ENST00000564628 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
NME3-207ENST00000564628 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
NME3-207ENST00000564628 ERASQ7Z444 233 aa12.34□□□□□ -0.43
NME3-207ENST00000564628 MAP1LC3CQ9BXW4 147 aa12.34□□□□□ -0.43
NME3-207ENST00000564628 IGLV10-54A0A075B6I4 117 aa12.33□□□□□ -0.44
NME3-207ENST00000564628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
NME3-207ENST00000564628 AKR1D1P51857 326 aa12.33□□□□□ -0.44
NME3-207ENST00000564628 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
NME3-207ENST00000564628 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
NME3-207ENST00000564628 USP17L23D6RBM5 183 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 NPSP0C0P6 89 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
NME3-207ENST00000564628 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
NME3-207ENST00000564628 KRTDAPP60985 99 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 Q6ZN92 141 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 SCXQ7RTU7 201 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 TMEM101Q96IK0 257 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
NME3-207ENST00000564628 CSDC2Q9Y534 153 aaKnown RBP12.3□□□□□ -0.44
NME3-207ENST00000564628 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 PRSS1P07477 247 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
NME3-207ENST00000564628 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 CDC42SE2Q9NRR3 84 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
NME3-207ENST00000564628 C3orf79P0CE67 100 aa12.28□□□□□ -0.44
NME3-207ENST00000564628 SYS1-DBNDD2H3BUS1 97 aa12.27□□□□□ -0.45
NME3-207ENST00000564628 OXTP01178 125 aa12.27□□□□□ -0.45
NME3-207ENST00000564628 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
NME3-207ENST00000564628 LINC00173Q6ZV60 143 aa12.27□□□□□ -0.45
NME3-207ENST00000564628 CHAC1Q9BUX1 264 aa12.27□□□□□ -0.45
NME3-207ENST00000564628 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
NME3-207ENST00000564628 C20orf202A1L168 122 aa12.26□□□□□ -0.45
NME3-207ENST00000564628 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
NME3-207ENST00000564628 CHCHD10Q8WYQ3 142 aaPredicted RBP12.26□□□□□ -0.45
NME3-207ENST00000564628 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
NME3-207ENST00000564628 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
NME3-207ENST00000564628 VCX2Q9H322 139 aa12.25□□□□□ -0.45
NME3-207ENST00000564628 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
NME3-207ENST00000564628 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
NME3-207ENST00000564628 SCGB1D1O95968 90 aa12.24□□□□□ -0.45
NME3-207ENST00000564628 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
NME3-207ENST00000564628 JOSD1Q15040 202 aaPredicted RBP12.24□□□□□ -0.45
NME3-207ENST00000564628 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
NME3-207ENST00000564628 TRAV12-1A0A0B4J245 112 aa12.23□□□□□ -0.45
NME3-207ENST00000564628 PMVKQ15126 192 aa12.23□□□□□ -0.45
NME3-207ENST00000564628 FAM104AQ969W3 186 aa12.23□□□□□ -0.45
NME3-207ENST00000564628 H0Y8G0 127 aa12.22□□□□□ -0.45
NME3-207ENST00000564628 FOXI1Q12951 378 aa12.22□□□□□ -0.45
NME3-207ENST00000564628 Q6ZUT4 128 aa12.22□□□□□ -0.45
NME3-207ENST00000564628 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
NME3-207ENST00000564628 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
NME3-207ENST00000564628 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
NME3-207ENST00000564628 TEX43Q6ZNM6 134 aa12.21□□□□□ -0.45
NME3-207ENST00000564628 CCL25O15444 150 aa12.2□□□□□ -0.46
NME3-207ENST00000564628 LINC01545Q5VT33 79 aa12.2□□□□□ -0.46
NME3-207ENST00000564628 C2orf88Q9BSF0 95 aa12.2□□□□□ -0.46
NME3-207ENST00000564628 CST9LQ9H4G1 147 aa12.2□□□□□ -0.46
NME3-207ENST00000564628 XCL1P47992 114 aa12.19□□□□□ -0.46
NME3-207ENST00000564628 CNBPP62633 177 aaKnown RBP12.19□□□□□ -0.46
NME3-207ENST00000564628 SS18Q15532 418 aa12.19□□□□□ -0.46
NME3-207ENST00000564628 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
NME3-207ENST00000564628 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
NME3-207ENST00000564628 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 PYY3Q5JQD4 70 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 CD164L2Q6UWJ8 174 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 AMELXQ99217 191 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 PLA2G2DQ9UNK4 145 aa12.18□□□□□ -0.46
NME3-207ENST00000564628 CHTOPQ9Y3Y2 248 aaKnown RBP12.18□□□□□ -0.46
NME3-207ENST00000564628 hDV102S1A0JD36 115 aa12.17□□□□□ -0.46
NME3-207ENST00000564628 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
NME3-207ENST00000564628 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
NME3-207ENST00000564628 GVQW2A0A096LPI5 108 aaPredicted RBP12.16□□□□□ -0.46
NME3-207ENST00000564628 F8VRH5 84 aa12.16□□□□□ -0.46
NME3-207ENST00000564628 SLPIP03973 132 aa12.16□□□□□ -0.46
NME3-207ENST00000564628 ODF1Q14990 250 aa12.16□□□□□ -0.46
NME3-207ENST00000564628 PLNP26678 52 aa12.15□□□□□ -0.46
NME3-207ENST00000564628 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
NME3-207ENST00000564628 DPM2O94777 84 aa12.14□□□□□ -0.47
NME3-207ENST00000564628 SEC11AP67812 179 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms