RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RPL39P62891 51 aaKnown RBP9.33□□□□□ -0.92
SPG7-210ENST00000564409 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
SPG7-210ENST00000564409 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
SPG7-210ENST00000564409 RAB5AP20339 215 aa9.32□□□□□ -0.92
SPG7-210ENST00000564409 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
SPG7-210ENST00000564409 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPG7-210ENST00000564409 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
SPG7-210ENST00000564409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
SPG7-210ENST00000564409 NPYP01303 97 aa9.31□□□□□ -0.92
SPG7-210ENST00000564409 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
SPG7-210ENST00000564409 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
SPG7-210ENST00000564409 LAMTOR2Q9Y2Q5 125 aa9.31□□□□□ -0.92
SPG7-210ENST00000564409 PYGO1Q9Y3Y4 419 aa9.31□□□□□ -0.92
SPG7-210ENST00000564409 A0A0J9YXV3 536 aa9.3□□□□□ -0.92
SPG7-210ENST00000564409 IFI27P40305 119 aaPredicted RBP9.3□□□□□ -0.92
SPG7-210ENST00000564409 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
SPG7-210ENST00000564409 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
SPG7-210ENST00000564409 IFITM10A6NMD0 228 aa9.29□□□□□ -0.92
SPG7-210ENST00000564409 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
SPG7-210ENST00000564409 NDUFA1O15239 70 aa9.29□□□□□ -0.92
SPG7-210ENST00000564409 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
SPG7-210ENST00000564409 PNRC1Q12796 327 aaPredicted RBP9.29□□□□□ -0.92
SPG7-210ENST00000564409 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
SPG7-210ENST00000564409 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
SPG7-210ENST00000564409 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
SPG7-210ENST00000564409 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
SPG7-210ENST00000564409 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
SPG7-210ENST00000564409 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
SPG7-210ENST00000564409 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
SPG7-210ENST00000564409 OPRPNQ99935 248 aaPredicted RBP9.27□□□□□ -0.93
SPG7-210ENST00000564409 A0A087WZ39 114 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 K7EMI3 77 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 MT-ND6P03923 174 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 TMEM141Q96I45 108 aa9.26□□□□□ -0.93
SPG7-210ENST00000564409 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
SPG7-210ENST00000564409 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
SPG7-210ENST00000564409 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
SPG7-210ENST00000564409 NPSP0C0P6 89 aa9.24□□□□□ -0.93
SPG7-210ENST00000564409 RAB14P61106 215 aa9.24□□□□□ -0.93
SPG7-210ENST00000564409 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
SPG7-210ENST00000564409 LINC00242Q5T6M2 205 aa9.23□□□□□ -0.93
SPG7-210ENST00000564409 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
SPG7-210ENST00000564409 Q8N8P6 123 aa9.23□□□□□ -0.93
SPG7-210ENST00000564409 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
SPG7-210ENST00000564409 CYSLTR1Q9Y271 337 aa9.23□□□□□ -0.93
SPG7-210ENST00000564409 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
SPG7-210ENST00000564409 G0S2P27469 103 aa9.22□□□□□ -0.93
SPG7-210ENST00000564409 ORMDL2Q53FV1 153 aa9.22□□□□□ -0.93
SPG7-210ENST00000564409 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
SPG7-210ENST00000564409 Q6ZN92 141 aa9.22□□□□□ -0.93
SPG7-210ENST00000564409 KIAA0087Q14695 138 aa9.21□□□□□ -0.94
SPG7-210ENST00000564409 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
SPG7-210ENST00000564409 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.94
SPG7-210ENST00000564409 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
SPG7-210ENST00000564409 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 UBE2D1P51668 147 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 PAPPA-AS1Q5QFB9 102 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 C2orf66Q6UXQ4 117 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 VCX2Q9H322 139 aa9.2□□□□□ -0.94
SPG7-210ENST00000564409 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
SPG7-210ENST00000564409 TNXBP22105 4242 aa9.19□□□□□ -0.94
SPG7-210ENST00000564409 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
SPG7-210ENST00000564409 PACRGQ96M98 296 aaPredicted RBP9.19□□□□□ -0.94
SPG7-210ENST00000564409 AMELXQ99217 191 aa9.19□□□□□ -0.94
SPG7-210ENST00000564409 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
SPG7-210ENST00000564409 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
SPG7-210ENST00000564409 SEC11AP67812 179 aa9.18□□□□□ -0.94
SPG7-210ENST00000564409 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
SPG7-210ENST00000564409 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
SPG7-210ENST00000564409 CTDSP1Q9GZU7 261 aa9.17□□□□□ -0.94
SPG7-210ENST00000564409 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
SPG7-210ENST00000564409 IGIPA6NJ69 53 aa9.16□□□□□ -0.94
SPG7-210ENST00000564409 PRSS2P07478 247 aa9.16□□□□□ -0.94
SPG7-210ENST00000564409 ODF1Q14990 250 aa9.16□□□□□ -0.94
SPG7-210ENST00000564409 TRAV9-1A0A075B6T8 112 aa9.15□□□□□ -0.94
SPG7-210ENST00000564409 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
SPG7-210ENST00000564409 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
SPG7-210ENST00000564409 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.94
SPG7-210ENST00000564409 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 CKS1BP61024 79 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 HERVK_113P63121 156 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 C6orf226Q5I0X4 101 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 Q8IZM0 81 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
SPG7-210ENST00000564409 H0Y9J4 135 aa9.13□□□□□ -0.95
SPG7-210ENST00000564409 M0QXV9 152 aa9.13□□□□□ -0.95
SPG7-210ENST00000564409 CLLU1Q5K131 121 aa9.13□□□□□ -0.95
SPG7-210ENST00000564409 UBE2BP63146 152 aa9.12□□□□□ -0.95
SPG7-210ENST00000564409 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
SPG7-210ENST00000564409 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
SPG7-210ENST00000564409 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
SPG7-210ENST00000564409 ERASQ7Z444 233 aa9.11□□□□□ -0.95
SPG7-210ENST00000564409 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
SPG7-210ENST00000564409 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
SPG7-210ENST00000564409 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
SPG7-210ENST00000564409 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms