RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SPANXA1Q9NS26 97 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 CYSLTR1Q9Y271 337 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
RNF40-205ENST00000563909 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
RNF40-205ENST00000563909 LINC00614P0C842 121 aa10.16□□□□□ -0.78
RNF40-205ENST00000563909 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
RNF40-205ENST00000563909 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
RNF40-205ENST00000563909 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
RNF40-205ENST00000563909 AP5S1Q9NUS5 200 aa10.15□□□□□ -0.78
RNF40-205ENST00000563909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.15□□□□□ -0.78
RNF40-205ENST00000563909 IGKV3OR2-268A0A0C4DH90 116 aa10.14□□□□□ -0.79
RNF40-205ENST00000563909 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
RNF40-205ENST00000563909 PANO1I0J062 215 aa10.13□□□□□ -0.79
RNF40-205ENST00000563909 NPSP0C0P6 89 aa10.13□□□□□ -0.79
RNF40-205ENST00000563909 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
RNF40-205ENST00000563909 Q6ZUT4 128 aa10.13□□□□□ -0.79
RNF40-205ENST00000563909 URB1-AS1Q96HZ7 61 aa10.13□□□□□ -0.79
RNF40-205ENST00000563909 IGLV10-54A0A075B6I4 117 aa10.12□□□□□ -0.79
RNF40-205ENST00000563909 CCL25O15444 150 aa10.12□□□□□ -0.79
RNF40-205ENST00000563909 SS18Q15532 418 aa10.12□□□□□ -0.79
RNF40-205ENST00000563909 BAGE3Q86Y29 109 aa10.12□□□□□ -0.79
RNF40-205ENST00000563909 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
RNF40-205ENST00000563909 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
RNF40-205ENST00000563909 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
RNF40-205ENST00000563909 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
RNF40-205ENST00000563909 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 Q6ZN92 141 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 ERASQ7Z444 233 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
RNF40-205ENST00000563909 FAM104AQ969W3 186 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 TIMM17AQ99595 171 aa10.1□□□□□ -0.79
RNF40-205ENST00000563909 OPRPNQ99935 248 aaPredicted RBP10.1□□□□□ -0.79
RNF40-205ENST00000563909 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
RNF40-205ENST00000563909 HBDP02042 147 aa10.09□□□□□ -0.79
RNF40-205ENST00000563909 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
RNF40-205ENST00000563909 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
RNF40-205ENST00000563909 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
RNF40-205ENST00000563909 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
RNF40-205ENST00000563909 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
RNF40-205ENST00000563909 GAGE12HA6NDE8 117 aa10.08□□□□□ -0.8
RNF40-205ENST00000563909 VCX2Q9H322 139 aa10.08□□□□□ -0.8
RNF40-205ENST00000563909 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
RNF40-205ENST00000563909 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
RNF40-205ENST00000563909 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
RNF40-205ENST00000563909 A0A096LNJ9 63 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 HSBP1O75506 76 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 XCL1P47992 114 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 CD164L2Q6UWJ8 174 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 AMELXQ99217 191 aa10.06□□□□□ -0.8
RNF40-205ENST00000563909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 PMCHL1Q16048 86 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
RNF40-205ENST00000563909 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 DPH3Q96FX2 82 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
RNF40-205ENST00000563909 SERF1AO75920 110 aa10.04□□□□□ -0.8
RNF40-205ENST00000563909 PRSS1P07477 247 aa10.04□□□□□ -0.8
RNF40-205ENST00000563909 FOXI1Q12951 378 aa10.04□□□□□ -0.8
RNF40-205ENST00000563909 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
RNF40-205ENST00000563909 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
RNF40-205ENST00000563909 ATP5LO75964 103 aa10.03□□□□□ -0.8
RNF40-205ENST00000563909 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
RNF40-205ENST00000563909 UBE2D1P51668 147 aa10.02□□□□□ -0.81
RNF40-205ENST00000563909 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
RNF40-205ENST00000563909 LINC00310P59036 64 aa10.01□□□□□ -0.81
RNF40-205ENST00000563909 SEC11AP67812 179 aa10.01□□□□□ -0.81
RNF40-205ENST00000563909 PMVKQ15126 192 aa10.01□□□□□ -0.81
RNF40-205ENST00000563909 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
RNF40-205ENST00000563909 COX7A2LO14548 114 aa10□□□□□ -0.81
RNF40-205ENST00000563909 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
RNF40-205ENST00000563909 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
RNF40-205ENST00000563909 FAM19A3Q7Z5A8 133 aa10□□□□□ -0.81
RNF40-205ENST00000563909 CST9LQ9H4G1 147 aa10□□□□□ -0.81
RNF40-205ENST00000563909 A0A087WYN8 130 aa9.99□□□□□ -0.81
RNF40-205ENST00000563909 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
RNF40-205ENST00000563909 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
RNF40-205ENST00000563909 NUPR1O60356 82 aa9.99□□□□□ -0.81
RNF40-205ENST00000563909 MALP21145 153 aa9.99□□□□□ -0.81
RNF40-205ENST00000563909 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
RNF40-205ENST00000563909 NDUFA6P56556 154 aa9.98□□□□□ -0.81
RNF40-205ENST00000563909 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
RNF40-205ENST00000563909 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
RNF40-205ENST00000563909 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
RNF40-205ENST00000563909 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
RNF40-205ENST00000563909 hDV102S1A0JD36 115 aa9.97□□□□□ -0.81
RNF40-205ENST00000563909 LEPROTL1O95214 131 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms