RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
COMMD4-205ENST00000562310 COX6A2Q02221 97 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 Q8N3U1 123 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 J3QQQ9 107 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 SIVA1O15304 175 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 CLPSL2Q6UWE3 100 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 KLK12Q9UKR0 248 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
COMMD4-205ENST00000562310 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
COMMD4-205ENST00000562310 IGHV3OR16-9A0A0B4J2B5 98 aa9.7□□□□□ -0.86
COMMD4-205ENST00000562310 MYMXA0A1B0GTQ4 84 aa9.7□□□□□ -0.86
COMMD4-205ENST00000562310 SPINK8P0C7L1 97 aa9.7□□□□□ -0.86
COMMD4-205ENST00000562310 MIAQ16674 131 aa9.7□□□□□ -0.86
COMMD4-205ENST00000562310 A0A087WZ39 114 aa9.69□□□□□ -0.86
COMMD4-205ENST00000562310 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
COMMD4-205ENST00000562310 ZNF815PA8K554 130 aa9.69□□□□□ -0.86
COMMD4-205ENST00000562310 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
COMMD4-205ENST00000562310 CD164L2Q6UWJ8 174 aa9.69□□□□□ -0.86
COMMD4-205ENST00000562310 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-205ENST00000562310 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
COMMD4-205ENST00000562310 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 XCL1P47992 114 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 C10orf126Q8N4M7 172 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 UBE2WQ96B02 151 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 HIGD1BQ9P298 99 aa9.68□□□□□ -0.86
COMMD4-205ENST00000562310 LINC00587B1AMM8 73 aa9.67□□□□□ -0.86
COMMD4-205ENST00000562310 K7EP13 123 aa9.67□□□□□ -0.86
COMMD4-205ENST00000562310 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
COMMD4-205ENST00000562310 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
COMMD4-205ENST00000562310 TTTY13Q9BZ97 58 aa9.67□□□□□ -0.86
COMMD4-205ENST00000562310 COX7A2LO14548 114 aa9.66□□□□□ -0.86
COMMD4-205ENST00000562310 ZFAND6Q6FIF0 208 aa9.66□□□□□ -0.86
COMMD4-205ENST00000562310 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
COMMD4-205ENST00000562310 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
COMMD4-205ENST00000562310 TP73-AS1Q9UF72 201 aa9.66□□□□□ -0.86
COMMD4-205ENST00000562310 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 CTAG1AP78358 180 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 FOXI1Q12951 378 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 SFTA2Q6UW10 78 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 NDUFA12Q9UI09 145 aa9.64□□□□□ -0.87
COMMD4-205ENST00000562310 GAGE12HA6NDE8 117 aa9.63□□□□□ -0.87
COMMD4-205ENST00000562310 NDUFA1O15239 70 aa9.63□□□□□ -0.87
COMMD4-205ENST00000562310 MALP21145 153 aa9.63□□□□□ -0.87
COMMD4-205ENST00000562310 HSD52Q0P140 79 aa9.63□□□□□ -0.87
COMMD4-205ENST00000562310 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
COMMD4-205ENST00000562310 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 M0R143 59 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 APOMO95445 188 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 RMI2Q96E14 147 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 Q9H8V8 135 aa9.62□□□□□ -0.87
COMMD4-205ENST00000562310 HERV-K104P63124 156 aa9.61□□□□□ -0.87
COMMD4-205ENST00000562310 TAL2Q16559 108 aa9.61□□□□□ -0.87
COMMD4-205ENST00000562310 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
COMMD4-205ENST00000562310 PRSS2P07478 247 aa9.6□□□□□ -0.87
COMMD4-205ENST00000562310 Q8IZM0 81 aa9.6□□□□□ -0.87
COMMD4-205ENST00000562310 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
COMMD4-205ENST00000562310 A0A0J9YXY3 114 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 TMEM238C9JI98 176 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 TIMM17BO60830 172 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 CXCL5P42830 114 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 ZNF625Q96I27 306 aaPredicted RBP9.59□□□□□ -0.87
COMMD4-205ENST00000562310 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
COMMD4-205ENST00000562310 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
COMMD4-205ENST00000562310 TTC32Q5I0X7 151 aa9.58□□□□□ -0.88
COMMD4-205ENST00000562310 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
COMMD4-205ENST00000562310 RYR3Q15413 4870 aa9.57□□□□□ -0.88
COMMD4-205ENST00000562310 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
COMMD4-205ENST00000562310 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
COMMD4-205ENST00000562310 HIST1H4GQ99525 98 aa9.57□□□□□ -0.88
COMMD4-205ENST00000562310 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
COMMD4-205ENST00000562310 HINT1P49773 126 aaPredicted RBP9.56□□□□□ -0.88
COMMD4-205ENST00000562310 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
COMMD4-205ENST00000562310 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
COMMD4-205ENST00000562310 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
COMMD4-205ENST00000562310 Q9HAA7 133 aa9.56□□□□□ -0.88
COMMD4-205ENST00000562310 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
COMMD4-205ENST00000562310 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
COMMD4-205ENST00000562310 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
COMMD4-205ENST00000562310 BVES-AS1Q5T3Y7 98 aa9.55□□□□□ -0.88
COMMD4-205ENST00000562310 Q6ZVH6 145 aa9.55□□□□□ -0.88
COMMD4-205ENST00000562310 EREGO14944 169 aa9.54□□□□□ -0.88
COMMD4-205ENST00000562310 CKS1BP61024 79 aa9.54□□□□□ -0.88
COMMD4-205ENST00000562310 CEND1Q8N111 149 aa9.54□□□□□ -0.88
COMMD4-205ENST00000562310 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
COMMD4-205ENST00000562310 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
COMMD4-205ENST00000562310 GCSHP23434 173 aa9.53□□□□□ -0.88
COMMD4-205ENST00000562310 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
COMMD4-205ENST00000562310 BATFQ16520 125 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms