RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 FAM24AA6NFZ4 105 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 INS-IGF2F8WCM5 200 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 C3orf84H3BNL1 204 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 K7EIL1 84 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 BPY2O14599 106 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 LEPROTO15243 131 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 HYPMO75409 117 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 INSP01308 110 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 SLC25A4P12235 298 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 PTHLHP12272 177 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 FABP4P15090 132 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 COX7CP15954 63 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 NFYAP23511 347 aaPredicted RBP2.66□□□□□ -1.98
LRRC28-222ENST00000561431 PATE2Q6UY27 113 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 SPATA12Q7Z6I5 190 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 ZFAND2AQ8N6M9 145 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 ZNF431Q8TF32 576 aaPredicted RBP2.66□□□□□ -1.98
LRRC28-222ENST00000561431 C4orf3Q8WVX3 66 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 ZNF414Q96IQ9 312 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 RNF5Q99942 180 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 FAM103A1Q9BTL3 118 aaKnown RBP2.66□□□□□ -1.98
LRRC28-222ENST00000561431 CHCHD7Q9BUK0 85 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 RPP21Q9H633 154 aaKnown RBP2.66□□□□□ -1.98
LRRC28-222ENST00000561431 ANAPC11Q9NYG5 84 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 PHLDA3Q9Y5J5 127 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
LRRC28-222ENST00000561431 PLXNB1O43157 2135 aa2.65□□□□□ -1.98
LRRC28-222ENST00000561431 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-222ENST00000561431 IGHV3-21A0A0B4J1V1 117 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 SNCGO76070 127 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 HLA-DQA1P01909 254 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 IGHV3-30-3P0DP02 117 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 CMC4P56277 68 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-222ENST00000561431 TSPEAR-AS2P59090 65 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 ASB16-AS1Q495Z4 193 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 ZNF660Q6AZW8 331 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-222ENST00000561431 FP248Q71RG6 208 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-222ENST00000561431 UPK3BQ9BT76 320 aa2.65□□□□□ -1.99
LRRC28-222ENST00000561431 MUC21A0A0G2JKD1 596 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 RBAKDNA6NC62 111 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 E7EUB6 86 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 H3BUA1 57 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 K7ERS5 55 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 PPYP01298 95 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 SAA1P0DJI8 122 aaPredicted RBP2.64□□□□□ -1.99
LRRC28-222ENST00000561431 SLC25A6P12236 298 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 TPT1P13693 172 aaKnown RBP2.64□□□□□ -1.99
LRRC28-222ENST00000561431 ATP5EP56381 51 aaPredicted RBP2.64□□□□□ -1.99
LRRC28-222ENST00000561431 FXYD3Q14802 87 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 PLGLAQ15195 96 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 C10orf55Q5SWW7 151 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 DPPA3Q6W0C5 159 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 ZNF818PQ6ZRF7 136 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 SBSPONQ8IVN8 264 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 AMN1Q8IY45 258 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 TMEM256Q8N2U0 113 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 C15orf56Q8N910 161 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 SCGB3A1Q96QR1 104 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 DSCR8Q96T75 97 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 FXYD6Q9H0Q3 95 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 RABAC1Q9UI14 185 aa2.64□□□□□ -1.99
LRRC28-222ENST00000561431 IGLV11-55A0A075B6I3 123 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 IGHV3-49A0A0A0MS15 119 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 TRAV3A0A0B4J244 114 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 TRBV7-7A0A0K0K1E9 115 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 GRIFINA4D1Z8 144 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 ZNF861PO60384 105 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 APCSP02743 223 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 PRH1P02810 166 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 TRGV3P03979 118 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 APELAP0DMC3 54 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 FXYD4P59646 89 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 SEC11AP67812 179 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 KLK9Q2XQG4 91 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 SOSTDC1Q6X4U4 206 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 ZFP2Q6ZN57 461 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 KRTAP11-1Q8IUC1 163 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 C15orf53Q8NAA6 179 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 TMEM167AQ8TBQ9 72 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 S100A16Q96FQ6 103 aaKnown RBP2.63□□□□□ -1.99
LRRC28-222ENST00000561431 KLK9Q9UKQ9 250 aa2.63□□□□□ -1.99
LRRC28-222ENST00000561431 FAM223BA6NKX1 122 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 A6NN06 94 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 CREBL2O60519 120 aaPredicted RBP2.62□□□□□ -1.99
LRRC28-222ENST00000561431 TCL1BO95988 128 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 CFDP00746 253 aaPredicted RBP2.62□□□□□ -1.99
LRRC28-222ENST00000561431 FUSP35637 526 aaKnown RBP eCLIP2.62□□□□□ -1.99
LRRC28-222ENST00000561431 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 MIC13Q5XKP0 118 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 FAM223AQ8IWN6 122 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 LINC00167Q96N53 147 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 ST20Q9HBF5 79 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 TMEM242Q9NWH2 141 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 HHLA3Q9XRX5 114 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 TENM3Q9P273 2699 aa2.62□□□□□ -1.99
LRRC28-222ENST00000561431 STAB2Q8WWQ8 2551 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms