RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 P01737 135 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 FCER1GP30273 86 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 LINC00467Q9BRT7 94 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 DEFB4AO15263 64 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 NPC2P61916 151 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 H3BT86 120 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 MIFP14174 115 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 DKK2Q9UBU2 259 aa8.33□□□□□ -1.08
HERC1-214ENST00000561400 MUC4Q99102 2169 aa8.32□□□□□ -1.08
HERC1-214ENST00000561400 PLAC8L1A1L4L8 177 aa8.32□□□□□ -1.08
HERC1-214ENST00000561400 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
HERC1-214ENST00000561400 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
HERC1-214ENST00000561400 IFI27L1Q96BM0 104 aa8.32□□□□□ -1.08
HERC1-214ENST00000561400 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
HERC1-214ENST00000561400 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
HERC1-214ENST00000561400 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
HERC1-214ENST00000561400 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
HERC1-214ENST00000561400 IGHV3-16A0A0C4DH30 117 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 MAPKAPK5-AS1Q8N8E1 139 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 PRSS3P2Q8NHM4 247 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 Q9UF83 564 aa8.3□□□□□ -1.08
HERC1-214ENST00000561400 ACYP1P07311 99 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
HERC1-214ENST00000561400 Q6ZRU5 148 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 HBDP02042 147 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
HERC1-214ENST00000561400 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
HERC1-214ENST00000561400 U3KQK5 164 aa8.29□□□□□ -1.08
HERC1-214ENST00000561400 C11orf68Q9H3H3 251 aaKnown RBP8.28□□□□□ -1.08
HERC1-214ENST00000561400 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
HERC1-214ENST00000561400 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
HERC1-214ENST00000561400 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
HERC1-214ENST00000561400 S100A4P26447 101 aaKnown RBP8.27□□□□□ -1.09
HERC1-214ENST00000561400 DAZ2Q13117 558 aaKnown RBP8.27□□□□□ -1.09
HERC1-214ENST00000561400 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
HERC1-214ENST00000561400 C11orf45Q8TAV5 145 aa8.27□□□□□ -1.09
HERC1-214ENST00000561400 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
HERC1-214ENST00000561400 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
HERC1-214ENST00000561400 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
HERC1-214ENST00000561400 ZNF22P17026 224 aaPredicted RBP8.25□□□□□ -1.09
HERC1-214ENST00000561400 Q6ZTI0 123 aa8.25□□□□□ -1.09
HERC1-214ENST00000561400 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
HERC1-214ENST00000561400 H3BS24 57 aa8.25□□□□□ -1.09
HERC1-214ENST00000561400 RPL18AQ02543 176 aaKnown RBP8.25□□□□□ -1.09
HERC1-214ENST00000561400 TRGV1A0A0A0MS02 117 aa8.24□□□□□ -1.09
HERC1-214ENST00000561400 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
HERC1-214ENST00000561400 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
HERC1-214ENST00000561400 IFI27P40305 119 aaPredicted RBP8.24□□□□□ -1.09
HERC1-214ENST00000561400 TWIST1Q15672 202 aa8.24□□□□□ -1.09
HERC1-214ENST00000561400 GFRA4Q9GZZ7 299 aa8.24□□□□□ -1.09
HERC1-214ENST00000561400 DEFB130BP0DP73 79 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 DEFB130AP0DP74 79 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 ATXN8Q156A1 80 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 ZNF876PQ49A33 203 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 LYZL1Q6UWQ5 148 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 SDIM1Q6ZPB5 146 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
HERC1-214ENST00000561400 DAZ4Q86SG3 579 aaKnown RBP8.22□□□□□ -1.09
HERC1-214ENST00000561400 DAZ3Q9NR90 486 aaKnown RBP8.22□□□□□ -1.09
HERC1-214ENST00000561400 M0R381 172 aa8.22□□□□□ -1.09
HERC1-214ENST00000561400 NANOS2P60321 138 aaKnown RBP8.22□□□□□ -1.09
HERC1-214ENST00000561400 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
HERC1-214ENST00000561400 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
HERC1-214ENST00000561400 PAX4O43316 350 aa8.21□□□□□ -1.09
HERC1-214ENST00000561400 DAD1P61803 113 aa8.21□□□□□ -1.09
HERC1-214ENST00000561400 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.09
HERC1-214ENST00000561400 NXPH4O95158 308 aa8.21□□□□□ -1.1
HERC1-214ENST00000561400 FHL2Q14192 279 aa8.21□□□□□ -1.1
HERC1-214ENST00000561400 SPANXN1Q5VSR9 72 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 Q6ZTC4 211 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 SMCR5Q8TEV8 140 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 DNAH7Q8WXX0 4024 aa8.2□□□□□ -1.1
HERC1-214ENST00000561400 TRGV2A0A075B6R0 118 aa8.19□□□□□ -1.1
HERC1-214ENST00000561400 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
HERC1-214ENST00000561400 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
HERC1-214ENST00000561400 IGHV4-4A0A075B6R2 117 aa8.19□□□□□ -1.1
HERC1-214ENST00000561400 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
HERC1-214ENST00000561400 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
HERC1-214ENST00000561400 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 COPS9Q8WXC6 57 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 PRO1854Q9UHT4 67 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 CFC1P0CG37 223 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
HERC1-214ENST00000561400 SS18Q15532 418 aa8.18□□□□□ -1.1
HERC1-214ENST00000561400 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms