RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TMEM101Q96IK0 257 aa5.19□□□□□ -1.58
TPM1-231ENST00000561395 CHCHD5Q9BSY4 110 aa5.19□□□□□ -1.58
TPM1-231ENST00000561395 CHAC1Q9BUX1 264 aa5.19□□□□□ -1.58
TPM1-231ENST00000561395 CDC42SE2Q9NRR3 84 aa5.19□□□□□ -1.58
TPM1-231ENST00000561395 TP73-AS1Q9UF72 201 aa5.19□□□□□ -1.58
TPM1-231ENST00000561395 IGKV2D-26A0A0A0MRZ7 120 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 A0A0J9YXV3 536 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 TINCRA0A1B0GVN0 87 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 E9PLD3 99 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 DLEU1O43261 78 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
TPM1-231ENST00000561395 NMUP48645 174 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 UBE2D1P51668 147 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 HNRNPA3P51991 378 aaKnown RBP5.18□□□□□ -1.58
TPM1-231ENST00000561395 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 BOD1L2Q8IYS8 172 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
TPM1-231ENST00000561395 TIRAPP58753 221 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 HERVK_113P61574 105 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 TMEM170BQ5T4T1 132 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 LELP1Q5T871 98 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 PCP2Q8IVA1 136 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 DNAH6Q9C0G6 4158 aa5.17□□□□□ -1.58
TPM1-231ENST00000561395 IGLV4-60A0A075B6I1 120 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 DEFB131BA0A096LNP1 70 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 TRAV10A0A0B4J240 114 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 A0A1B0GUV1 79 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 TMEM223A0PJW6 202 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 C2orf91Q6ZV80 131 aa5.16□□□□□ -1.58
TPM1-231ENST00000561395 MRPS16Q9Y3D3 137 aaKnown RBP5.16□□□□□ -1.58
TPM1-231ENST00000561395 TRAV13-1A0A0B4J241 112 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 RBX1P62877 108 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 HERVK_113P63121 156 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 SEC11AP67812 179 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 CTAG1AP78358 180 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 MPV17L2Q567V2 206 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 LINC00336Q6ZUF6 198 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
TPM1-231ENST00000561395 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
TPM1-231ENST00000561395 TRAV8-6A0A0B4J262 113 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 TMEM262E9PQX1 116 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 LEPROTO15243 131 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 SIVA1O15304 175 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 TSPEAR-AS2P59090 65 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 COX6A2Q02221 97 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 LINC00242Q5T6M2 205 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 LYPD5Q6UWN5 251 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 MAPKAPK5-AS1Q8N8E1 139 aa5.14□□□□□ -1.59
TPM1-231ENST00000561395 VPS13DQ5THJ4 4388 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 MYMXA0A1B0GTQ4 84 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 H3BRM9 83 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 J3QQQ9 107 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 M0R143 59 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 SPINK8P0C7L1 97 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 C15orf53Q8NAA6 179 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 PLEKHB2Q96CS7 222 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 SNHG12Q9BXW3 62 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 HIGD1BQ9P298 99 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
TPM1-231ENST00000561395 IGHV3-64A0A075B6Q5 118 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 IGHV1-58A0A0C4DH39 117 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 IGKV3OR2-268A0A0C4DH90 116 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 IGLV5-39A0A0G2JS06 123 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 LINC00959A0A1B0GUT2 108 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 ZNF815PA8K554 130 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 IGHV3-30-3P0DP02 117 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 Q8N3U1 123 aa5.12□□□□□ -1.59
TPM1-231ENST00000561395 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 SMIM1B2RUZ4 78 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 CCL25O15444 150 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 ANGP03950 147 aaKnown RBP5.11□□□□□ -1.59
TPM1-231ENST00000561395 LGALS3P17931 250 aaKnown RBP5.11□□□□□ -1.59
TPM1-231ENST00000561395 HSD52Q0P140 79 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 ESRGQ1W209 222 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 CLPSL2Q6UWE3 100 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 LINC00269Q8N2A0 174 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
TPM1-231ENST00000561395 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
TPM1-231ENST00000561395 HINT1P49773 126 aaPredicted RBP5.1□□□□□ -1.59
TPM1-231ENST00000561395 REG3AQ06141 175 aa5.1□□□□□ -1.59
TPM1-231ENST00000561395 SS18Q15532 418 aa5.1□□□□□ -1.59
TPM1-231ENST00000561395 BATFQ16520 125 aa5.1□□□□□ -1.59
TPM1-231ENST00000561395 WFDC10BQ8IUB3 73 aa5.1□□□□□ -1.59
TPM1-231ENST00000561395 HERC1Q15751 4861 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 A0A087WZ39 114 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
TPM1-231ENST00000561395 BVES-AS1Q5T3Y7 98 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 PRR34Q9NV39 138 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 DYNC1H1Q14204 4646 aaKnown RBP5.09□□□□□ -1.59
TPM1-231ENST00000561395 DNAH2Q9P225 4427 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 PKD1P98161 4303 aa5.09□□□□□ -1.59
TPM1-231ENST00000561395 HSPG2P98160 4391 aa5.09□□□□□ -1.6
TPM1-231ENST00000561395 IGLL5B9A064 214 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 IGHV3-30P01768 117 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 IGHV3-33P01772 117 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 IGHV3-30-5P0DP03 117 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 XCL1P47992 114 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms