RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 AKAP9Q99996 3911 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 DNAL4O96015 105 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 MALP21145 153 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 DYNLRB2Q8TF09 96 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 ESM1Q9NQ30 184 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 CHD6Q8TD26 2715 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 PF4P02776 101 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 DEFB114Q30KQ6 69 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
RABGGTA-220ENST00000560998 PLA2G2AP14555 144 aa10.04□□□□□ -0.8
RABGGTA-220ENST00000560998 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
RABGGTA-220ENST00000560998 PDZD2O15018 2839 aa10.03□□□□□ -0.8
RABGGTA-220ENST00000560998 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
RABGGTA-220ENST00000560998 CCDC168Q8NDH2 2452 aa10.03□□□□□ -0.8
RABGGTA-220ENST00000560998 A8MZ25 164 aa10.03□□□□□ -0.8
RABGGTA-220ENST00000560998 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
RABGGTA-220ENST00000560998 F5H768 121 aa10.02□□□□□ -0.81
RABGGTA-220ENST00000560998 J3QKU1 62 aa10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 CYSTM1Q9H1C7 97 aa10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 TRAV13-1A0A0B4J241 112 aa10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 KIR2DL5BQ8NHK3 375 aa10.01□□□□□ -0.81
RABGGTA-220ENST00000560998 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 NDUFC2O95298 119 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 Q5XG85 94 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 OBSCN-AS1Q96MR7 158 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 Q9H8V8 135 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
RABGGTA-220ENST00000560998 KMT2BQ9UMN6 2715 aaPredicted RBP10□□□□□ -0.81
RABGGTA-220ENST00000560998 A0A1W2PRX2 142 aa9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 HTN1P15515 57 aa9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 C11orf44Q8N8P7 122 aa9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 FAM218AQ96MZ4 157 aa9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-220ENST00000560998 CCL24O00175 119 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 OXTP01178 125 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 PIK3CD-AS1Q5SR53 167 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 DSCR8Q96T75 97 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 NF1P21359 2839 aa9.98□□□□□ -0.81
RABGGTA-220ENST00000560998 PRM2P04554 102 aa9.97□□□□□ -0.81
RABGGTA-220ENST00000560998 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
RABGGTA-220ENST00000560998 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-220ENST00000560998 ATP5EP2Q5VTU8 51 aa9.97□□□□□ -0.81
RABGGTA-220ENST00000560998 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.81
RABGGTA-220ENST00000560998 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.81
RABGGTA-220ENST00000560998 C16orf95Q9H693 158 aa9.96□□□□□ -0.81
RABGGTA-220ENST00000560998 INSP01308 110 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 LINC01006Q8NI28 216 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 ITPR2Q14571 2701 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 H0YGX0 51 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 CRPP02741 224 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 HRCT1Q6UXD1 115 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-220ENST00000560998 IGHV3-73A0A0B4J1V6 119 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 ACANP16112 2415 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 HELZ2Q9BYK8 2649 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 PROK1P58294 105 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 Q9HAA7 133 aa9.94□□□□□ -0.82
RABGGTA-220ENST00000560998 WNK1Q9H4A3 2382 aa9.93□□□□□ -0.82
RABGGTA-220ENST00000560998 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
RABGGTA-220ENST00000560998 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
RABGGTA-220ENST00000560998 STHQ8IWL8 128 aa9.92□□□□□ -0.82
RABGGTA-220ENST00000560998 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
RABGGTA-220ENST00000560998 UNC79Q9P2D8 2635 aa9.91□□□□□ -0.82
RABGGTA-220ENST00000560998 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
RABGGTA-220ENST00000560998 Q6ZSN1 163 aa9.91□□□□□ -0.82
RABGGTA-220ENST00000560998 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.91□□□□□ -0.82
RABGGTA-220ENST00000560998 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
RABGGTA-220ENST00000560998 A0A087WVE0 104 aa9.9□□□□□ -0.83
RABGGTA-220ENST00000560998 EPM2AB3EWF7 344 aa9.9□□□□□ -0.83
RABGGTA-220ENST00000560998 COX6A2Q02221 97 aa9.9□□□□□ -0.83
RABGGTA-220ENST00000560998 PRO0628Q9UI54 55 aa9.9□□□□□ -0.83
RABGGTA-220ENST00000560998 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
RABGGTA-220ENST00000560998 BCE1O60756 84 aa9.89□□□□□ -0.83
RABGGTA-220ENST00000560998 HILS1P60008 231 aa9.89□□□□□ -0.83
RABGGTA-220ENST00000560998 FHL2Q14192 279 aa9.89□□□□□ -0.83
RABGGTA-220ENST00000560998 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms