RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TEX43Q6ZNM6 134 aa10□□□□□ -0.81
RABGGTA-219ENST00000560871 FA2HQ7L5A8 372 aa10□□□□□ -0.81
RABGGTA-219ENST00000560871 AP5S1Q9NUS5 200 aa10□□□□□ -0.81
RABGGTA-219ENST00000560871 VPS13BQ7Z7G8 4022 aa9.99□□□□□ -0.81
RABGGTA-219ENST00000560871 UBE2D1P51668 147 aa9.99□□□□□ -0.81
RABGGTA-219ENST00000560871 HAMPP81172 84 aa9.99□□□□□ -0.81
RABGGTA-219ENST00000560871 Q5VSD8 79 aa9.99□□□□□ -0.81
RABGGTA-219ENST00000560871 Q6ZN92 141 aa9.99□□□□□ -0.81
RABGGTA-219ENST00000560871 A0A096LNJ9 63 aa9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 SMR3BP02814 79 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 ERASQ7Z444 233 aa9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 C2orf88Q9BSF0 95 aa9.98□□□□□ -0.81
RABGGTA-219ENST00000560871 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
RABGGTA-219ENST00000560871 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
RABGGTA-219ENST00000560871 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 LINC00614P0C842 121 aa9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 MALP21145 153 aa9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 VCX2Q9H322 139 aa9.96□□□□□ -0.82
RABGGTA-219ENST00000560871 COLCA2A8K830 154 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 INAFM2P0DMQ5 153 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 COX6A2Q02221 97 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
RABGGTA-219ENST00000560871 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
RABGGTA-219ENST00000560871 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
RABGGTA-219ENST00000560871 APOMO95445 188 aa9.94□□□□□ -0.82
RABGGTA-219ENST00000560871 TRGC2P03986 189 aa9.94□□□□□ -0.82
RABGGTA-219ENST00000560871 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 A0A087WZ39 114 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 PANO1I0J062 215 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 SCO1O75880 301 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 RAB5BP61020 215 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
RABGGTA-219ENST00000560871 HBDP02042 147 aa9.92□□□□□ -0.82
RABGGTA-219ENST00000560871 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
RABGGTA-219ENST00000560871 CIRBPQ14011 172 aaKnown RBP9.92□□□□□ -0.82
RABGGTA-219ENST00000560871 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
RABGGTA-219ENST00000560871 PMCHL1Q16048 86 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
RABGGTA-219ENST00000560871 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
RABGGTA-219ENST00000560871 Q6ZRU5 148 aa9.9□□□□□ -0.82
RABGGTA-219ENST00000560871 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-219ENST00000560871 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
RABGGTA-219ENST00000560871 HERVK_113P63121 156 aa9.89□□□□□ -0.83
RABGGTA-219ENST00000560871 SEC11AP67812 179 aa9.89□□□□□ -0.83
RABGGTA-219ENST00000560871 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
RABGGTA-219ENST00000560871 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 LINC00310P59036 64 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 KIAA0087Q14695 138 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 PMVKQ15126 192 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
RABGGTA-219ENST00000560871 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
RABGGTA-219ENST00000560871 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
RABGGTA-219ENST00000560871 A0A096LNI7 61 aa9.86□□□□□ -0.83
RABGGTA-219ENST00000560871 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
RABGGTA-219ENST00000560871 F8WDY8 70 aa9.86□□□□□ -0.83
RABGGTA-219ENST00000560871 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-219ENST00000560871 ATP5LO75964 103 aa9.85□□□□□ -0.83
RABGGTA-219ENST00000560871 BAGE3Q86Y29 109 aa9.85□□□□□ -0.83
RABGGTA-219ENST00000560871 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-219ENST00000560871 MRPL35Q9NZE8 188 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-219ENST00000560871 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
RABGGTA-219ENST00000560871 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
RABGGTA-219ENST00000560871 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
RABGGTA-219ENST00000560871 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
RABGGTA-219ENST00000560871 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
RABGGTA-219ENST00000560871 IGKV2-24A0A0C4DH68 120 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 NDUFA1O15239 70 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 HSBP1O75506 76 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 SERF1AO75920 110 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 LINC00469Q8N7U9 141 aa9.83□□□□□ -0.84
RABGGTA-219ENST00000560871 A0A087WYN8 130 aa9.82□□□□□ -0.84
RABGGTA-219ENST00000560871 Q8IZM0 81 aa9.82□□□□□ -0.84
RABGGTA-219ENST00000560871 FAM19A2Q8N3H0 131 aa9.82□□□□□ -0.84
RABGGTA-219ENST00000560871 PACRGQ96M98 296 aaPredicted RBP9.82□□□□□ -0.84
RABGGTA-219ENST00000560871 C6orf48Q9UBA6 75 aa9.82□□□□□ -0.84
RABGGTA-219ENST00000560871 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
RABGGTA-219ENST00000560871 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
RABGGTA-219ENST00000560871 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
RABGGTA-219ENST00000560871 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
RABGGTA-219ENST00000560871 NUPR1O60356 82 aa9.8□□□□□ -0.84
RABGGTA-219ENST00000560871 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
RABGGTA-219ENST00000560871 NDUFA6P56556 154 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms