RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 DEFB4AO15263 64 aa13.33□□□□□ -0.28
HMBOX1-215ENST00000560599 IFITM1P13164 125 aa13.33□□□□□ -0.28
HMBOX1-215ENST00000560599 CIRBPQ14011 172 aaKnown RBP13.33□□□□□ -0.28
HMBOX1-215ENST00000560599 IGLV4-60A0A075B6I1 120 aa13.32□□□□□ -0.28
HMBOX1-215ENST00000560599 EGFEM1PQ0D2K5 195 aa13.32□□□□□ -0.28
HMBOX1-215ENST00000560599 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
HMBOX1-215ENST00000560599 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
HMBOX1-215ENST00000560599 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
HMBOX1-215ENST00000560599 HERV-K104P63124 156 aa13.31□□□□□ -0.28
HMBOX1-215ENST00000560599 COPS9Q8WXC6 57 aa13.31□□□□□ -0.28
HMBOX1-215ENST00000560599 A0A1B0GUV1 79 aa13.3□□□□□ -0.28
HMBOX1-215ENST00000560599 SH2D6Q7Z4S9 175 aa13.3□□□□□ -0.28
HMBOX1-215ENST00000560599 Q9H8V8 135 aa13.3□□□□□ -0.28
HMBOX1-215ENST00000560599 OXLD1Q5BKU9 147 aa13.3□□□□□ -0.28
HMBOX1-215ENST00000560599 NOTCH3Q9UM47 2321 aa13.29□□□□□ -0.28
HMBOX1-215ENST00000560599 KRTAP10-11P60412 298 aa13.28□□□□□ -0.28
HMBOX1-215ENST00000560599 RBX1P62877 108 aa13.28□□□□□ -0.28
HMBOX1-215ENST00000560599 ADAMTSL4-AS1Q5T5F5 129 aa13.28□□□□□ -0.28
HMBOX1-215ENST00000560599 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
HMBOX1-215ENST00000560599 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
HMBOX1-215ENST00000560599 PRSS2P07478 247 aa13.27□□□□□ -0.29
HMBOX1-215ENST00000560599 PRIMA1Q86XR5 153 aa13.27□□□□□ -0.29
HMBOX1-215ENST00000560599 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
HMBOX1-215ENST00000560599 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 SS18Q15532 418 aa13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 MRPL23Q16540 153 aaKnown RBP13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
HMBOX1-215ENST00000560599 A0A096LPF7 62 aa13.25□□□□□ -0.29
HMBOX1-215ENST00000560599 LOC107984156A0A0G2JMH3 177 aa13.25□□□□□ -0.29
HMBOX1-215ENST00000560599 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
HMBOX1-215ENST00000560599 ARL17AQ8IVW1 177 aa13.25□□□□□ -0.29
HMBOX1-215ENST00000560599 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
HMBOX1-215ENST00000560599 F8P00451 2351 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 A0A087WZ39 114 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 F8W1H4 67 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 MEIG1Q5JSS6 88 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 PPDPFQ9H3Y8 114 aa13.24□□□□□ -0.29
HMBOX1-215ENST00000560599 TRBV20-1A0A075B6N2 111 aa13.23□□□□□ -0.29
HMBOX1-215ENST00000560599 IGHV3OR16-9A0A0B4J2B5 98 aa13.23□□□□□ -0.29
HMBOX1-215ENST00000560599 OCIAD2Q56VL3 154 aa13.23□□□□□ -0.29
HMBOX1-215ENST00000560599 SFTA2Q6UW10 78 aa13.23□□□□□ -0.29
HMBOX1-215ENST00000560599 TENM1Q9UKZ4 2725 aa13.23□□□□□ -0.29
HMBOX1-215ENST00000560599 K7ERU9 68 aa13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 EIF4EBP3O60516 100 aaPredicted RBP13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 HTN3P15516 51 aa13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 H3BMG7 143 aa13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 Q1RN00 199 aa13.22□□□□□ -0.29
HMBOX1-215ENST00000560599 PSMB2P49721 201 aa13.21□□□□□ -0.3
HMBOX1-215ENST00000560599 LELP1Q5T871 98 aa13.21□□□□□ -0.3
HMBOX1-215ENST00000560599 LINC00308Q8TCZ7 52 aa13.21□□□□□ -0.3
HMBOX1-215ENST00000560599 VWFP04275 2813 aa13.2□□□□□ -0.3
HMBOX1-215ENST00000560599 ATRQ13535 2644 aa13.19□□□□□ -0.3
HMBOX1-215ENST00000560599 SCGB1C2P0DMR2 95 aa13.19□□□□□ -0.3
HMBOX1-215ENST00000560599 NPC2P61916 151 aa13.18□□□□□ -0.3
HMBOX1-215ENST00000560599 RETNQ9HD89 108 aa13.18□□□□□ -0.3
HMBOX1-215ENST00000560599 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
HMBOX1-215ENST00000560599 H3BNG1 76 aa13.17□□□□□ -0.3
HMBOX1-215ENST00000560599 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
HMBOX1-215ENST00000560599 PRO0461Q9UI25 63 aa13.17□□□□□ -0.3
HMBOX1-215ENST00000560599 H7C2G1 150 aa13.16□□□□□ -0.3
HMBOX1-215ENST00000560599 XCL1P47992 114 aa13.16□□□□□ -0.3
HMBOX1-215ENST00000560599 DAND5Q8N907 189 aa13.16□□□□□ -0.3
HMBOX1-215ENST00000560599 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
HMBOX1-215ENST00000560599 TCL1BO95988 128 aa13.14□□□□□ -0.31
HMBOX1-215ENST00000560599 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-215ENST00000560599 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
HMBOX1-215ENST00000560599 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 G3V4G9 280 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 REG3AQ06141 175 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 WFDC2Q14508 124 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 Q8IZM0 81 aa13.13□□□□□ -0.31
HMBOX1-215ENST00000560599 A0A0U1RRA0 63 aa13.12□□□□□ -0.31
HMBOX1-215ENST00000560599 COX7A2LO14548 114 aa13.11□□□□□ -0.31
HMBOX1-215ENST00000560599 TRIAP1O43715 76 aa13.11□□□□□ -0.31
HMBOX1-215ENST00000560599 COX6CP09669 75 aa13.11□□□□□ -0.31
HMBOX1-215ENST00000560599 ATXN8Q156A1 80 aa13.11□□□□□ -0.31
HMBOX1-215ENST00000560599 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
HMBOX1-215ENST00000560599 CXCL5P42830 114 aa13.1□□□□□ -0.31
HMBOX1-215ENST00000560599 CHCHD10Q8WYQ3 142 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-215ENST00000560599 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
HMBOX1-215ENST00000560599 C6orf226Q5I0X4 101 aa13.09□□□□□ -0.31
HMBOX1-215ENST00000560599 LINC00158P58513 81 aa13.08□□□□□ -0.32
HMBOX1-215ENST00000560599 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
HMBOX1-215ENST00000560599 CBY1Q9Y3M2 126 aa13.08□□□□□ -0.32
HMBOX1-215ENST00000560599 J3QR89 54 aa13.07□□□□□ -0.32
HMBOX1-215ENST00000560599 KPRPQ5T749 579 aaPredicted RBP13.07□□□□□ -0.32
HMBOX1-215ENST00000560599 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
HMBOX1-215ENST00000560599 Q6ZTC4 211 aa13.07□□□□□ -0.32
HMBOX1-215ENST00000560599 MTURNQ8N3F0 131 aa13.07□□□□□ -0.32
HMBOX1-215ENST00000560599 CYSRT1A8MQ03 144 aa13.06□□□□□ -0.32
HMBOX1-215ENST00000560599 M0QXV9 152 aa13.06□□□□□ -0.32
HMBOX1-215ENST00000560599 CFAP161Q6P656 301 aa13.06□□□□□ -0.32
HMBOX1-215ENST00000560599 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms