RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 LINC01545Q5VT33 79 aa9.11□□□□□ -0.95
TNFAIP2-207ENST00000560562 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
TNFAIP2-207ENST00000560562 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
TNFAIP2-207ENST00000560562 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
TNFAIP2-207ENST00000560562 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
TNFAIP2-207ENST00000560562 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
TNFAIP2-207ENST00000560562 POLR2KP53803 58 aaKnown RBP9.09□□□□□ -0.95
TNFAIP2-207ENST00000560562 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
TNFAIP2-207ENST00000560562 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 C20orf202A1L168 122 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 VCYO14598 125 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 PRSS1P07477 247 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 REG3AQ06141 175 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 PKHD1L1Q86WI1 4243 aa9.08□□□□□ -0.96
TNFAIP2-207ENST00000560562 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 I3L3M4 83 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 DDTP30046 118 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 PAM16Q9Y3D7 125 aa9.07□□□□□ -0.96
TNFAIP2-207ENST00000560562 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
TNFAIP2-207ENST00000560562 TCAPO15273 167 aa9.06□□□□□ -0.96
TNFAIP2-207ENST00000560562 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
TNFAIP2-207ENST00000560562 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 COTL1Q14019 142 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 ATP5LO75964 103 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 ATOH7Q8N100 152 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
TNFAIP2-207ENST00000560562 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
TNFAIP2-207ENST00000560562 PANO1I0J062 215 aa9.03□□□□□ -0.96
TNFAIP2-207ENST00000560562 TSHBP01222 138 aa9.03□□□□□ -0.96
TNFAIP2-207ENST00000560562 MAJINQ3KP22 176 aa9.03□□□□□ -0.96
TNFAIP2-207ENST00000560562 MIEN1Q9BRT3 115 aa9.03□□□□□ -0.96
TNFAIP2-207ENST00000560562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 UBE2L6O14933 153 aa9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 IGLC3P0DOY3 106 aa9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
TNFAIP2-207ENST00000560562 TRAV8-4A0A0B4J246 113 aa9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 H0Y8G0 127 aa9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 SLPIP03973 132 aa9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 G0S2P27469 103 aa9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 ODF1Q14990 250 aa9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
TNFAIP2-207ENST00000560562 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
TNFAIP2-207ENST00000560562 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
TNFAIP2-207ENST00000560562 C14orf144Q96I85 54 aa9□□□□□ -0.97
TNFAIP2-207ENST00000560562 PMCHL2Q9BQD1 86 aa9□□□□□ -0.97
TNFAIP2-207ENST00000560562 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 hDV102S1A0JD36 115 aa8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
TNFAIP2-207ENST00000560562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 FGF6P10767 208 aa8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 ERASQ7Z444 233 aa8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 SCGB3A1Q96QR1 104 aa8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 CYSLTR1Q9Y271 337 aa8.98□□□□□ -0.97
TNFAIP2-207ENST00000560562 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
TNFAIP2-207ENST00000560562 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
TNFAIP2-207ENST00000560562 HSBP1L1C9JCN9 74 aa8.97□□□□□ -0.97
TNFAIP2-207ENST00000560562 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
TNFAIP2-207ENST00000560562 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
TNFAIP2-207ENST00000560562 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
TNFAIP2-207ENST00000560562 Q6ZN92 141 aa8.96□□□□□ -0.98
TNFAIP2-207ENST00000560562 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
TNFAIP2-207ENST00000560562 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
TNFAIP2-207ENST00000560562 H7C423 109 aa8.95□□□□□ -0.98
TNFAIP2-207ENST00000560562 DPM2O94777 84 aa8.95□□□□□ -0.98
TNFAIP2-207ENST00000560562 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
TNFAIP2-207ENST00000560562 ANKRD39Q53RE8 183 aa8.95□□□□□ -0.98
TNFAIP2-207ENST00000560562 F8VRH5 84 aa8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 IGKCP01834 107 aa8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 CTAG1AP78358 180 aa8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 CIRBPQ14011 172 aaKnown RBP8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
TNFAIP2-207ENST00000560562 COX8AP10176 69 aa8.93□□□□□ -0.98
TNFAIP2-207ENST00000560562 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
TNFAIP2-207ENST00000560562 FOXI1Q12951 378 aa8.93□□□□□ -0.98
TNFAIP2-207ENST00000560562 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
TNFAIP2-207ENST00000560562 PLNP26678 52 aa8.92□□□□□ -0.98
TNFAIP2-207ENST00000560562 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
TNFAIP2-207ENST00000560562 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
TNFAIP2-207ENST00000560562 CHTOPQ9Y3Y2 248 aaKnown RBP8.92□□□□□ -0.98
TNFAIP2-207ENST00000560562 LINC00959A0A1B0GUT2 108 aa8.91□□□□□ -0.98
TNFAIP2-207ENST00000560562 KRTAP29-1A8MX34 341 aaPredicted RBP8.91□□□□□ -0.98
TNFAIP2-207ENST00000560562 NPSP0C0P6 89 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms