RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 Q9HAA7 133 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 IGKCP01834 107 aa12.1□□□□□ -0.47
CLPX-203ENST00000558958 XCL1P47992 114 aa12.1□□□□□ -0.47
CLPX-203ENST00000558958 HERVK_113P63121 156 aa12.1□□□□□ -0.47
CLPX-203ENST00000558958 GEMIN7Q9H840 131 aaKnown RBP12.1□□□□□ -0.47
CLPX-203ENST00000558958 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
CLPX-203ENST00000558958 Q6ZR54 194 aa12.09□□□□□ -0.47
CLPX-203ENST00000558958 C1orf43Q9BWL3 253 aa12.09□□□□□ -0.47
CLPX-203ENST00000558958 IGLV5-45A0A087WSX0 123 aa12.08□□□□□ -0.47
CLPX-203ENST00000558958 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.47
CLPX-203ENST00000558958 M0R2N4 97 aa12.08□□□□□ -0.47
CLPX-203ENST00000558958 KRTAP26-1Q6PEX3 210 aa12.08□□□□□ -0.47
CLPX-203ENST00000558958 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
CLPX-203ENST00000558958 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
CLPX-203ENST00000558958 PYY3Q5JQD4 70 aa12.08□□□□□ -0.48
CLPX-203ENST00000558958 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.48
CLPX-203ENST00000558958 HYDINQ4G0P3 5121 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 FOXI1Q12951 378 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 LINC00469Q8N7U9 141 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 RMI2Q96E14 147 aa12.07□□□□□ -0.48
CLPX-203ENST00000558958 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
CLPX-203ENST00000558958 ATOH7Q8N100 152 aa12.06□□□□□ -0.48
CLPX-203ENST00000558958 LCE6AA0A183 80 aa12.05□□□□□ -0.48
CLPX-203ENST00000558958 A0A087WZ39 114 aa12.04□□□□□ -0.48
CLPX-203ENST00000558958 C5orf38Q86SI9 138 aa12.04□□□□□ -0.48
CLPX-203ENST00000558958 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
CLPX-203ENST00000558958 DNAH10Q8IVF4 4471 aa12.03□□□□□ -0.48
CLPX-203ENST00000558958 TM2D2Q9BX73 214 aa12.03□□□□□ -0.48
CLPX-203ENST00000558958 H3BRM9 83 aa12.02□□□□□ -0.48
CLPX-203ENST00000558958 COX7A2LO14548 114 aa12.02□□□□□ -0.48
CLPX-203ENST00000558958 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
CLPX-203ENST00000558958 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
CLPX-203ENST00000558958 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
CLPX-203ENST00000558958 STPG4Q8N801 248 aa12.01□□□□□ -0.49
CLPX-203ENST00000558958 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
CLPX-203ENST00000558958 SPINK8P0C7L1 97 aa12□□□□□ -0.49
CLPX-203ENST00000558958 C6orf223Q8N319 242 aa12□□□□□ -0.49
CLPX-203ENST00000558958 DNAH2Q9P225 4427 aa12□□□□□ -0.49
CLPX-203ENST00000558958 hDV102S1A0JD36 115 aa11.99□□□□□ -0.49
CLPX-203ENST00000558958 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
CLPX-203ENST00000558958 MALP21145 153 aa11.99□□□□□ -0.49
CLPX-203ENST00000558958 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
CLPX-203ENST00000558958 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
CLPX-203ENST00000558958 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
CLPX-203ENST00000558958 IGLV5-39A0A0G2JS06 123 aa11.97□□□□□ -0.49
CLPX-203ENST00000558958 SMIM6P0DI80 62 aa11.97□□□□□ -0.49
CLPX-203ENST00000558958 HERVK_113P61574 105 aa11.97□□□□□ -0.49
CLPX-203ENST00000558958 C1orf134Q5TEV5 83 aa11.97□□□□□ -0.49
CLPX-203ENST00000558958 RYR2Q92736 4967 aa11.97□□□□□ -0.49
CLPX-203ENST00000558958 IGHV1-58A0A0C4DH39 117 aa11.96□□□□□ -0.49
CLPX-203ENST00000558958 PSCAO43653 123 aa11.96□□□□□ -0.49
CLPX-203ENST00000558958 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 E9PLD3 99 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 APOMO95445 188 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 ANKRD39Q53RE8 183 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
CLPX-203ENST00000558958 FRAS1Q86XX4 4008 aa11.94□□□□□ -0.5
CLPX-203ENST00000558958 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
CLPX-203ENST00000558958 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
CLPX-203ENST00000558958 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
CLPX-203ENST00000558958 CFAP161Q6P656 301 aa11.93□□□□□ -0.5
CLPX-203ENST00000558958 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
CLPX-203ENST00000558958 LEPROTO15243 131 aa11.92□□□□□ -0.5
CLPX-203ENST00000558958 PAM16Q9Y3D7 125 aa11.92□□□□□ -0.5
CLPX-203ENST00000558958 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
CLPX-203ENST00000558958 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 LECT2O14960 151 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 WFDC2Q14508 124 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 KIAA0087Q14695 138 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 SPATA45Q537H7 98 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 Q8IZM0 81 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 COX7B2Q8TF08 81 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 TOMM7Q9P0U1 55 aa11.9□□□□□ -0.5
CLPX-203ENST00000558958 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
CLPX-203ENST00000558958 J3QQQ9 107 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 S100A12P80511 92 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 PRSS2P07478 247 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 HIGD2BQ4VC39 106 aa11.89□□□□□ -0.51
CLPX-203ENST00000558958 RTL8CO15255 209 aa11.88□□□□□ -0.51
CLPX-203ENST00000558958 NMUP48645 174 aa11.88□□□□□ -0.51
CLPX-203ENST00000558958 C6orf226Q5I0X4 101 aa11.88□□□□□ -0.51
CLPX-203ENST00000558958 C12orf57Q99622 126 aa11.88□□□□□ -0.51
CLPX-203ENST00000558958 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
CLPX-203ENST00000558958 LINC00526Q96FQ7 95 aa11.87□□□□□ -0.51
CLPX-203ENST00000558958 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
CLPX-203ENST00000558958 LINC00518Q8N0U6 118 aa11.86□□□□□ -0.51
CLPX-203ENST00000558958 PCP2Q8IVA1 136 aa11.85□□□□□ -0.51
CLPX-203ENST00000558958 NTN5Q8WTR8 489 aaPredicted RBP11.85□□□□□ -0.51
CLPX-203ENST00000558958 TTTY13Q9BZ97 58 aa11.85□□□□□ -0.51
CLPX-203ENST00000558958 A0A087WTM6 91 aa11.84□□□□□ -0.51
CLPX-203ENST00000558958 C14orf177Q52M58 125 aa11.84□□□□□ -0.51
CLPX-203ENST00000558958 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
CLPX-203ENST00000558958 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
CLPX-203ENST00000558958 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms