RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LRP5O75197 1615 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 RETNLBQ9BQ08 111 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 UBE2D4Q9Y2X8 147 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 Q8N2B8 174 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 CCDC140Q96MF4 163 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 Q8N9L7 120 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 TRBV6-8A0A0A6YYG3 113 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 ZNF843Q8N446 348 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 TRBV10-3A0A0K0K1G6 114 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 ZNF580Q9UK33 172 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 RALGAPA2Q2PPJ7 1873 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 PAPPAQ13219 1627 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 PCOTHQ58A44 107 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 Q6ZVQ6 151 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 AMELXQ99217 191 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 DOCK4Q8N1I0 1966 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 A8MUN3 132 aa2.67□□□□□ -1.98
ATXN3-248ENST00000558190 C3orf84H3BNL1 204 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 PARP14Q460N5 1801 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 WIPF1O43516 503 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 SPINK1P00995 79 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 LMO4P61968 165 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 LINC00315P59091 139 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 K7ENP7 123 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 COX8CQ7Z4L0 72 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 C9orf85Q96MD7 179 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 SYCNQ0VAF6 134 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 CHCHD7Q9BUK0 85 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 COL18A1P39060 1754 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 TANC2Q9HCD6 1990 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 hDV103S1A0JD37 113 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 ATP11AUNQ6ZP68 121 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 Q8N6K4 173 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 APOC4P55056 127 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 CNFNQ9BYD5 112 aa2.66□□□□□ -1.98
ATXN3-248ENST00000558190 COL16A1Q07092 1604 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-248ENST00000558190 GRNP28799 593 aaKnown RBP2.66□□□□□ -1.98
ATXN3-248ENST00000558190 PRR9Q5T870 116 aa2.65□□□□□ -1.98
ATXN3-248ENST00000558190 LINC01006Q8NI28 216 aa2.65□□□□□ -1.98
ATXN3-248ENST00000558190 K7EQG2 157 aa2.65□□□□□ -1.98
ATXN3-248ENST00000558190 GBF1Q92538 1859 aa2.65□□□□□ -1.98
ATXN3-248ENST00000558190 C16orf74Q96GX8 76 aa2.65□□□□□ -1.98
ATXN3-248ENST00000558190 FAM218AQ96MZ4 157 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 PLAC8L1A1L4L8 177 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 LOC100131303A0A0U1RQF7 123 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 MGAMO43451 1857 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 C6orf223Q8N319 242 aa2.65□□□□□ -1.99
ATXN3-248ENST00000558190 KIF25-AS1Q9Y6Z4 181 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 COX17Q14061 63 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 C8orf87E5RJ46 101 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 KIAA1549Q9HCM3 1950 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 DENND4CQ5VZ89 1909 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 F8W735 103 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-248ENST00000558190 IGF2-ASQ6U949 168 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 PSMG3-AS1Q96PY0 264 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 KLLNB2CW77 178 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 SHANK3Q9BYB0 1731 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 SMCR5Q8TEV8 140 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 LRRC37AA6NMS7 1700 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 FRMPD3Q5JV73 1810 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 ARID2Q68CP9 1835 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 COL24A1Q17RW2 1714 aa2.64□□□□□ -1.99
ATXN3-248ENST00000558190 SSC5DA1L4H1 1573 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 LTBP4Q8N2S1 1624 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 FHL2Q14192 279 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 PAPPA2Q9BXP8 1791 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-248ENST00000558190 TSC2P49815 1807 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 ACYP2P14621 99 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 PRYO14603 147 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 LINC00482Q8N8I6 264 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 C10orf99Q6UWK7 81 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 USP24Q9UPU5 2620 aa2.63□□□□□ -1.99
ATXN3-248ENST00000558190 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 OXLD1Q5BKU9 147 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 MUC7Q8TAX7 377 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 C2orf48Q96LS8 159 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 NRXN2Q9P2S2 1712 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 BRWD3Q6RI45 1802 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 COL6A5A8TX70 2615 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 IGLV4-60A0A075B6I1 120 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 CD164Q04900 197 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 MAST4O15021 2626 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 IGF2RP11717 2491 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 MAP6D1Q9H9H5 199 aa2.62□□□□□ -1.99
ATXN3-248ENST00000558190 EIF4EBP3O60516 100 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-248ENST00000558190 ANAPC1Q9H1A4 1944 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 NLRC5Q86WI3 1866 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 IGHV6-1A0A0B4J1U7 121 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 A0A1W2PNU3 283 aaPredicted RBP2.61□□□□□ -1.99
ATXN3-248ENST00000558190 IGKV2-24A0A0C4DH68 120 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 CEP192Q8TEP8 1941 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 TNS1Q9HBL0 1735 aaKnown RBP2.61□□□□□ -1.99
ATXN3-248ENST00000558190 BBC3Q96PG8 261 aaPredicted RBP2.61□□□□□ -1.99
ATXN3-248ENST00000558190 IGLV5-39A0A0G2JS06 123 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 MRGPRG-AS1Q2M3A8 158 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms