RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
SLIRP-207ENST00000556831 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
SLIRP-207ENST00000556831 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
SLIRP-207ENST00000556831 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
SLIRP-207ENST00000556831 LINC00614P0C842 121 aa9.26□□□□□ -0.93
SLIRP-207ENST00000556831 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
SLIRP-207ENST00000556831 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
SLIRP-207ENST00000556831 MAP1LC3CQ9BXW4 147 aa9.26□□□□□ -0.93
SLIRP-207ENST00000556831 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
SLIRP-207ENST00000556831 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
SLIRP-207ENST00000556831 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
SLIRP-207ENST00000556831 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 CFAP161Q6P656 301 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 FA2HQ7L5A8 372 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
SLIRP-207ENST00000556831 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
SLIRP-207ENST00000556831 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
SLIRP-207ENST00000556831 NPYP01303 97 aa9.24□□□□□ -0.93
SLIRP-207ENST00000556831 HAMPP81172 84 aa9.24□□□□□ -0.93
SLIRP-207ENST00000556831 SS18Q15532 418 aa9.24□□□□□ -0.93
SLIRP-207ENST00000556831 SRRM2Q9UQ35 2752 aaKnown RBP9.24□□□□□ -0.93
SLIRP-207ENST00000556831 A0A1B0GV90 55 aa9.23□□□□□ -0.93
SLIRP-207ENST00000556831 Q8N1X5 172 aa9.23□□□□□ -0.93
SLIRP-207ENST00000556831 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-207ENST00000556831 PMCHL2Q9BQD1 86 aa9.23□□□□□ -0.93
SLIRP-207ENST00000556831 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
SLIRP-207ENST00000556831 MAP1LC3AQ9H492 121 aa9.23□□□□□ -0.93
SLIRP-207ENST00000556831 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-207ENST00000556831 IGLC3P0DOY3 106 aa9.22□□□□□ -0.93
SLIRP-207ENST00000556831 SYS1-DBNDD2H3BUS1 97 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 PRSS1P07477 247 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 XCL1P47992 114 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 Q6ZN92 141 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 CDC42SE2Q9NRR3 84 aa9.21□□□□□ -0.94
SLIRP-207ENST00000556831 CCL25O15444 150 aa9.2□□□□□ -0.94
SLIRP-207ENST00000556831 XGP55808 180 aa9.2□□□□□ -0.94
SLIRP-207ENST00000556831 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
SLIRP-207ENST00000556831 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
SLIRP-207ENST00000556831 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SLIRP-207ENST00000556831 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
SLIRP-207ENST00000556831 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
SLIRP-207ENST00000556831 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
SLIRP-207ENST00000556831 TIMM21Q9BVV7 248 aa9.19□□□□□ -0.94
SLIRP-207ENST00000556831 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
SLIRP-207ENST00000556831 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
SLIRP-207ENST00000556831 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-207ENST00000556831 MALP21145 153 aa9.17□□□□□ -0.94
SLIRP-207ENST00000556831 RNASE13Q5GAN3 156 aaKnown RBP9.17□□□□□ -0.94
SLIRP-207ENST00000556831 Q6ZUT4 128 aa9.17□□□□□ -0.94
SLIRP-207ENST00000556831 NXT2Q9NPJ8 142 aaKnown RBP9.17□□□□□ -0.94
SLIRP-207ENST00000556831 FAM30AQ9NZY2 134 aa9.17□□□□□ -0.94
SLIRP-207ENST00000556831 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
SLIRP-207ENST00000556831 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
SLIRP-207ENST00000556831 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
SLIRP-207ENST00000556831 FOXI1Q12951 378 aa9.16□□□□□ -0.94
SLIRP-207ENST00000556831 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
SLIRP-207ENST00000556831 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
SLIRP-207ENST00000556831 IGHV3-64A0A075B6Q5 118 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 HBDP02042 147 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-207ENST00000556831 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 Q5VSD8 79 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 Q6ZSA8 131 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 Q8N8P6 123 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.94
SLIRP-207ENST00000556831 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 K7EMI3 77 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 COX7A2LO14548 114 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 G0S2P27469 103 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 CYSLTR1Q9Y271 337 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
SLIRP-207ENST00000556831 GVQW2A0A096LPI5 108 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-207ENST00000556831 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
SLIRP-207ENST00000556831 APOMO95445 188 aa9.13□□□□□ -0.95
SLIRP-207ENST00000556831 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
SLIRP-207ENST00000556831 CHAC1Q9BUX1 264 aa9.13□□□□□ -0.95
SLIRP-207ENST00000556831 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
SLIRP-207ENST00000556831 BATFQ16520 125 aa9.12□□□□□ -0.95
SLIRP-207ENST00000556831 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
SLIRP-207ENST00000556831 ORAOV1Q8WV07 137 aa9.12□□□□□ -0.95
SLIRP-207ENST00000556831 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
SLIRP-207ENST00000556831 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
SLIRP-207ENST00000556831 C2orf66Q6UXQ4 117 aa9.11□□□□□ -0.95
SLIRP-207ENST00000556831 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
SLIRP-207ENST00000556831 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
SLIRP-207ENST00000556831 DLEU1O43261 78 aa9.1□□□□□ -0.95
SLIRP-207ENST00000556831 ATP5LO75964 103 aa9.1□□□□□ -0.95
SLIRP-207ENST00000556831 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
SLIRP-207ENST00000556831 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms