RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-243ENST00000556671 NIT1Q86X76 327 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 Q8N976 141 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-243ENST00000556671 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-243ENST00000556671 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-243ENST00000556671 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-243ENST00000556671 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-243ENST00000556671 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 K7EP13 123 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 HLA-DQA1P01909 254 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 APCSP02743 223 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 Q0VG73 95 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-243ENST00000556671 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 LINC00269Q8N2A0 174 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
ATXN3-243ENST00000556671 A0A087WTM6 91 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 RBX1P62877 108 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 FRZBQ92765 325 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-243ENST00000556671 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
ATXN3-243ENST00000556671 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 ESDP10768 282 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
ATXN3-243ENST00000556671 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
ATXN3-243ENST00000556671 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
ATXN3-243ENST00000556671 A0A087WZ39 114 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 MT-ND6P03923 174 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 FGF6P10767 208 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 LAGE3Q14657 143 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 SS18Q15532 418 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 MIAQ16674 131 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-243ENST00000556671 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-243ENST00000556671 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 RYR3Q15413 4870 aa3.07□□□□□ -1.92
ATXN3-243ENST00000556671 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-243ENST00000556671 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 SRSF9Q13242 221 aaKnown RBP eCLIP3.06□□□□□ -1.92
ATXN3-243ENST00000556671 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 Q8N814 137 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-243ENST00000556671 IGLV7-46A0A075B6I9 117 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms