RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RHEBQ15382 184 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 MRPL52Q86TS9 123 aaKnown RBP7.3□□□□□ -1.24
ACTN1-221ENST00000556571 ZNF664Q8N3J9 261 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 LAMTOR2Q9Y2Q5 125 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 MUC2Q02817 5179 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 SS18Q15532 418 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 MAP1LC3AQ9H492 121 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 RPS10P5Q9NQ39 176 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
ACTN1-221ENST00000556571 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
ACTN1-221ENST00000556571 CCL25O15444 150 aa7.28□□□□□ -1.24
ACTN1-221ENST00000556571 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
ACTN1-221ENST00000556571 CARHSP1Q9Y2V2 147 aaKnown RBP7.28□□□□□ -1.24
ACTN1-221ENST00000556571 LOC107984640A0A0U1RRK4 108 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 MT-ND6P03923 174 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 C10orf91Q5T1B1 145 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 CD164L2Q6UWJ8 174 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
ACTN1-221ENST00000556571 CSDC2Q9Y534 153 aaKnown RBP7.27□□□□□ -1.25
ACTN1-221ENST00000556571 A0A1W2PNN7 141 aa7.26□□□□□ -1.25
ACTN1-221ENST00000556571 APOC3P02656 99 aa7.26□□□□□ -1.25
ACTN1-221ENST00000556571 SVBPQ8N300 66 aa7.26□□□□□ -1.25
ACTN1-221ENST00000556571 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
ACTN1-221ENST00000556571 SPANXA1Q9NS26 97 aa7.26□□□□□ -1.25
ACTN1-221ENST00000556571 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
ACTN1-221ENST00000556571 SNAPINO95295 136 aa7.25□□□□□ -1.25
ACTN1-221ENST00000556571 COX19Q49B96 90 aa7.25□□□□□ -1.25
ACTN1-221ENST00000556571 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 PRSS47A8MTI9 375 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 IFI27P40305 119 aaPredicted RBP7.24□□□□□ -1.25
ACTN1-221ENST00000556571 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
ACTN1-221ENST00000556571 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
ACTN1-221ENST00000556571 RNASE13Q5GAN3 156 aaKnown RBP7.24□□□□□ -1.25
ACTN1-221ENST00000556571 C1orf137Q5JT78 98 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 Q6ZUT4 128 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 Q8N8P6 123 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 PRR26Q8N8Z3 221 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 GNB1LQ9BYB4 327 aa7.24□□□□□ -1.25
ACTN1-221ENST00000556571 NXT2Q9NPJ8 142 aaKnown RBP7.24□□□□□ -1.25
ACTN1-221ENST00000556571 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 K7EMI3 77 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 APOMO95445 188 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 MALP21145 153 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 G0S2P27469 103 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 KIAA1644Q3SXP7 199 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
ACTN1-221ENST00000556571 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
ACTN1-221ENST00000556571 COX7A2LO14548 114 aa7.22□□□□□ -1.25
ACTN1-221ENST00000556571 CAMK2N2Q96S95 79 aa7.22□□□□□ -1.25
ACTN1-221ENST00000556571 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
ACTN1-221ENST00000556571 CYSLTR1Q9Y271 337 aa7.22□□□□□ -1.25
ACTN1-221ENST00000556571 IFITM10A6NMD0 228 aa7.21□□□□□ -1.26
ACTN1-221ENST00000556571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
ACTN1-221ENST00000556571 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
ACTN1-221ENST00000556571 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
ACTN1-221ENST00000556571 FABP9Q0Z7S8 132 aa7.21□□□□□ -1.26
ACTN1-221ENST00000556571 Q6ZN92 141 aa7.21□□□□□ -1.26
ACTN1-221ENST00000556571 PHF5AQ7RTV0 110 aaKnown RBP7.21□□□□□ -1.26
ACTN1-221ENST00000556571 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
ACTN1-221ENST00000556571 IGLV1-50A0A075B6I6 118 aa7.2□□□□□ -1.26
ACTN1-221ENST00000556571 RPL18AQ02543 176 aaKnown RBP7.2□□□□□ -1.26
ACTN1-221ENST00000556571 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
ACTN1-221ENST00000556571 C2orf88Q9BSF0 95 aa7.2□□□□□ -1.26
ACTN1-221ENST00000556571 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
ACTN1-221ENST00000556571 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
ACTN1-221ENST00000556571 H0Y9J4 135 aa7.19□□□□□ -1.26
ACTN1-221ENST00000556571 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
ACTN1-221ENST00000556571 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
ACTN1-221ENST00000556571 TMEM141Q96I45 108 aa7.19□□□□□ -1.26
ACTN1-221ENST00000556571 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
ACTN1-221ENST00000556571 A0A087WZ39 114 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 TGIF2-C20orf24A0A0A6YYL0 155 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 PRR4Q16378 134 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 PAPPA-AS1Q5QFB9 102 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 FA2HQ7L5A8 372 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
ACTN1-221ENST00000556571 VCX2Q9H322 139 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 TRAPPC1Q9Y5R8 145 aa7.18□□□□□ -1.26
ACTN1-221ENST00000556571 IGLV4-3A0A075B6K6 122 aa7.17□□□□□ -1.26
ACTN1-221ENST00000556571 C5orf38Q86SI9 138 aa7.17□□□□□ -1.26
ACTN1-221ENST00000556571 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
ACTN1-221ENST00000556571 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
ACTN1-221ENST00000556571 NPSP0C0P6 89 aa7.16□□□□□ -1.26
ACTN1-221ENST00000556571 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 RPL13AP40429 203 aaKnown RBP7.15□□□□□ -1.26
ACTN1-221ENST00000556571 UBE2D1P51668 147 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 SPAG11BQ08648 103 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 FAM104AQ969W3 186 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 SCGB3A1Q96QR1 104 aa7.15□□□□□ -1.26
ACTN1-221ENST00000556571 MRPL35Q9NZE8 188 aaKnown RBP7.15□□□□□ -1.26
ACTN1-221ENST00000556571 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
ACTN1-221ENST00000556571 F8WDY8 70 aa7.14□□□□□ -1.27
ACTN1-221ENST00000556571 KRTAP11-1Q8IUC1 163 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms