RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
SHMT2-221ENST00000555773 SYS1-DBNDD2H3BUS1 97 aa8.28□□□□□ -1.08
SHMT2-221ENST00000555773 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
SHMT2-221ENST00000555773 PET117Q6UWS5 81 aa8.28□□□□□ -1.08
SHMT2-221ENST00000555773 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
SHMT2-221ENST00000555773 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
SHMT2-221ENST00000555773 F8VRH5 84 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 COX7A2LO14548 114 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 RTL8CO15255 209 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 IGLC3P0DOY3 106 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
SHMT2-221ENST00000555773 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 A0A087WZ39 114 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 C3orf79P0CE67 100 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 COX6A2Q02221 97 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 ODF1Q14990 250 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 RYR3Q15413 4870 aa8.26□□□□□ -1.09
SHMT2-221ENST00000555773 IGLV4-69A0A075B6H9 119 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 H0Y8G0 127 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 MALP21145 153 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 KRTDAPP60985 99 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
SHMT2-221ENST00000555773 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
SHMT2-221ENST00000555773 LRCOL1A6NCL2 159 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 H3BRM9 83 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 APOMO95445 188 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 PLNP26678 52 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 AKR1D1P51857 326 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 LINC00469Q8N7U9 141 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 CHAC1Q9BUX1 264 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 CDKN2A-AS1Q9UH64 79 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 DNAH10Q8IVF4 4471 aa8.24□□□□□ -1.09
SHMT2-221ENST00000555773 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
SHMT2-221ENST00000555773 C20orf202A1L168 122 aa8.23□□□□□ -1.09
SHMT2-221ENST00000555773 EREGO14944 169 aa8.23□□□□□ -1.09
SHMT2-221ENST00000555773 DPM2O94777 84 aa8.23□□□□□ -1.09
SHMT2-221ENST00000555773 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
SHMT2-221ENST00000555773 A0A087WTM6 91 aa8.22□□□□□ -1.09
SHMT2-221ENST00000555773 C11orf86A6NJI1 115 aa8.22□□□□□ -1.09
SHMT2-221ENST00000555773 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
SHMT2-221ENST00000555773 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-221ENST00000555773 TNP2Q05952 138 aa8.22□□□□□ -1.09
SHMT2-221ENST00000555773 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.1
SHMT2-221ENST00000555773 IGKCP01834 107 aa8.21□□□□□ -1.1
SHMT2-221ENST00000555773 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
SHMT2-221ENST00000555773 OR10D4PQ8NGN7 298 aa8.21□□□□□ -1.1
SHMT2-221ENST00000555773 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
SHMT2-221ENST00000555773 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-221ENST00000555773 LECT2O14960 151 aa8.19□□□□□ -1.1
SHMT2-221ENST00000555773 WFDC2Q14508 124 aa8.19□□□□□ -1.1
SHMT2-221ENST00000555773 Q8N814 137 aa8.19□□□□□ -1.1
SHMT2-221ENST00000555773 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
SHMT2-221ENST00000555773 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
SHMT2-221ENST00000555773 F8WDY8 70 aa8.18□□□□□ -1.1
SHMT2-221ENST00000555773 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
SHMT2-221ENST00000555773 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
SHMT2-221ENST00000555773 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 PRSS2P07478 247 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
SHMT2-221ENST00000555773 HERVK_113P61574 105 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 SPAG11BQ08648 103 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 HIGD2BQ4VC39 106 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 Q8IZM0 81 aa8.16□□□□□ -1.1
SHMT2-221ENST00000555773 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-221ENST00000555773 LOC105371267A0A1B0GV96 52 aa8.15□□□□□ -1.1
SHMT2-221ENST00000555773 SCGB1D1O95968 90 aa8.15□□□□□ -1.1
SHMT2-221ENST00000555773 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
SHMT2-221ENST00000555773 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-221ENST00000555773 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
SHMT2-221ENST00000555773 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-221ENST00000555773 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
SHMT2-221ENST00000555773 FRAS1Q86XX4 4008 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 CXCL5P42830 114 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 CKS1BP61024 79 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
SHMT2-221ENST00000555773 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
SHMT2-221ENST00000555773 E9PLD3 99 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 NDUFA1O15239 70 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 LEPROTO15243 131 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 SLPIP03973 132 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 STPG4Q8N801 248 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
SHMT2-221ENST00000555773 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
SHMT2-221ENST00000555773 HSBP1L1C9JCN9 74 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms