RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-213	ENST00000555185	LOR	P23490	312 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	PNRC1	Q12796	327 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	RNASE13	Q5GAN3	156 aa	Known RBP	4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	LINC01551	Q86U37	167 aa		4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	OR2D3	Q8NGH3	330 aa		4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	TMEM101	Q96IK0	257 aa		4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	C2orf48	Q96LS8	159 aa		4.98	□□□□□ -1.61
PRKCH-213	ENST00000555185	SYNE2	Q8WXH0	6885 aa	Known RBP	4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185		H7C423	109 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	ESD	P10768	282 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	ZNF25	P17030	456 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	KRTAP10-6	P60371	365 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	ADIRF	Q15847	76 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	KRTAP19-2	Q3LHN2	52 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	BIN3	Q9NQY0	253 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	CDC42SE2	Q9NRR3	84 aa		4.97	□□□□□ -1.61
PRKCH-213	ENST00000555185	SNAPIN	O95295	136 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	FAM231D	Q6ZW35	169 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	SVBP	Q8N300	66 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	NUDT10	Q8NFP7	164 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	NUDT11	Q96G61	164 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	CTDSP1	Q9GZU7	261 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	C6orf48	Q9UBA6	75 aa		4.96	□□□□□ -1.62
PRKCH-213	ENST00000555185	C7orf77	A4D0Y5	90 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	NCR2	O95944	276 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	LINC00242	Q5T6M2	205 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	LINC00337	Q8N6G1	96 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	IMMP2L	Q96T52	175 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	RNASE7	Q9H1E1	156 aa	Known RBP	4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	OSTC	Q9NRP0	149 aa		4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	MRPL35	Q9NZE8	188 aa	Known RBP	4.95	□□□□□ -1.62
PRKCH-213	ENST00000555185	TRAV13-1	A0A0B4J241	112 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	SDHAF1	A6NFY7	115 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	GATC	O43716	136 aa	Known RBP	4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	MT-ND4L	P03901	98 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	TRGC1	P0CF51	173 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	CFC1B	P0CG36	223 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	PMCH	P20382	165 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	FOXA3	P55318	350 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	RHEB	Q15382	184 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	KRTAP13-3	Q3SY46	172 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	C9orf129	Q5T035	196 aa	Known RBP	4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	LYZL1	Q6UWQ5	148 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	ORAOV1	Q8WV07	137 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	ANAPC16	Q96DE5	110 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	TMEM242	Q9NWH2	141 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185		V9GYV3	84 aa		4.94	□□□□□ -1.62
PRKCH-213	ENST00000555185	PPP1R2P9	O14990	202 aa		4.93	□□□□□ -1.62
PRKCH-213	ENST00000555185	TLX1NB	P0CAT3	122 aa		4.93	□□□□□ -1.62
PRKCH-213	ENST00000555185	MRAP2	Q96G30	205 aa		4.93	□□□□□ -1.62
PRKCH-213	ENST00000555185	RPS10P5	Q9NQ39	176 aa		4.93	□□□□□ -1.62
PRKCH-213	ENST00000555185		A8MWL6	223 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	C1orf196	B1AJZ1	125 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185		I3L3M4	83 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	NDUFA1	O15239	70 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	SEC61B	P60468	96 aa	Known RBP	4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	TWIST1	Q15672	202 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	CT83	Q5H943	113 aa		4.92	□□□□□ -1.62
PRKCH-213	ENST00000555185	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKCH-213	ENST00000555185	SMIM27	A0A1W2PRY6	76 aa		4.91	□□□□□ -1.62
PRKCH-213	ENST00000555185	RPL28	P46779	137 aa	Known RBP	4.91	□□□□□ -1.62
PRKCH-213	ENST00000555185	RPS20	P60866	119 aa	Known RBP	4.91	□□□□□ -1.62
PRKCH-213	ENST00000555185	MRPL52	Q86TS9	123 aa	Known RBP	4.91	□□□□□ -1.62
PRKCH-213	ENST00000555185	XKRY2	A2RUG3	117 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	NUPR1	O60356	82 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	SCO1	O75880	301 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	CTRL	P40313	264 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185		Q6ZUT4	128 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	LINC00469	Q8N7U9	141 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	OR10D4P	Q8NGN7	298 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	SMCO4	Q9NRQ5	59 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	C22orf24	Q9Y442	160 aa		4.9	□□□□□ -1.63
PRKCH-213	ENST00000555185	IGKV2D-26	A0A0A0MRZ7	120 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185		F2Z2F3	143 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185	BCE1	O60756	84 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185	C2orf82	Q6UX34	121 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185	C3orf22	Q8N5N4	141 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185	NAT8B	Q9UHF3	227 aa		4.89	□□□□□ -1.63
PRKCH-213	ENST00000555185	FLG	P20930	4061 aa	Predicted RBP	4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	TRAV9-1	A0A075B6T8	112 aa		4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	HIGD1C	A8MV81	97 aa		4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	S100P	P25815	95 aa		4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	CBLN2	Q8IUK8	224 aa		4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	YPEL4	Q96NS1	127 aa		4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	MACF1	Q9UPN3	7388 aa	Known RBP	4.88	□□□□□ -1.63
PRKCH-213	ENST00000555185	RPL37AP8	A6NKH3	93 aa		4.87	□□□□□ -1.63
PRKCH-213	ENST00000555185	NDUFC2-KCTD14	E9PQ53	114 aa		4.87	□□□□□ -1.63
PRKCH-213	ENST00000555185		M0R2T5	61 aa		4.87	□□□□□ -1.63
PRKCH-213	ENST00000555185	UBE2D4	Q9Y2X8	147 aa		4.87	□□□□□ -1.63
PRKCH-213	ENST00000555185	TRBV24-1	A0A075B6N3	115 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185		A0A1B0GUT8	65 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	COLCA2	A8K830	154 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	FAM229B	Q4G0N7	80 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	FP248	Q71RG6	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	CNFN	Q9BYD5	112 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	ST20	Q9HBF5	79 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	XAGE1A	Q9HD64	81 aa		4.86	□□□□□ -1.63
PRKCH-213	ENST00000555185	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms