RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 U3KQK5 164 aa12.1□□□□□ -0.47
PCNX1-209ENST00000554879 CNFNQ9BYD5 112 aa12.1□□□□□ -0.47
PCNX1-209ENST00000554879 Q6ZTI0 123 aa12.1□□□□□ -0.47
PCNX1-209ENST00000554879 A0A096LPF7 62 aa12.09□□□□□ -0.47
PCNX1-209ENST00000554879 LINC00526Q96FQ7 95 aa12.09□□□□□ -0.47
PCNX1-209ENST00000554879 CSMD2Q7Z408 3487 aa12.09□□□□□ -0.47
PCNX1-209ENST00000554879 C20orf197Q8N268 126 aa12.09□□□□□ -0.47
PCNX1-209ENST00000554879 H3BT86 120 aa12.08□□□□□ -0.47
PCNX1-209ENST00000554879 IGHV3-30P01768 117 aa12.08□□□□□ -0.47
PCNX1-209ENST00000554879 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.47
PCNX1-209ENST00000554879 ZMAT4Q9H898 229 aa12.08□□□□□ -0.47
PCNX1-209ENST00000554879 NDUFA12Q9UI09 145 aa12.08□□□□□ -0.47
PCNX1-209ENST00000554879 SLC25A29Q8N8R3 303 aa12.08□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
PCNX1-209ENST00000554879 ACYP1P07311 99 aa12.07□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
PCNX1-209ENST00000554879 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
PCNX1-209ENST00000554879 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
PCNX1-209ENST00000554879 H7C423 109 aa12.07□□□□□ -0.48
PCNX1-209ENST00000554879 PFN2P35080 140 aa12.07□□□□□ -0.48
PCNX1-209ENST00000554879 HIVEP1P15822 2718 aa12.06□□□□□ -0.48
PCNX1-209ENST00000554879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-209ENST00000554879 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-209ENST00000554879 IGLV1-51P01701 117 aa12.06□□□□□ -0.48
PCNX1-209ENST00000554879 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
PCNX1-209ENST00000554879 NRACQ8N912 160 aa12.06□□□□□ -0.48
PCNX1-209ENST00000554879 APOC4P55056 127 aa12.06□□□□□ -0.48
PCNX1-209ENST00000554879 FAM236DA0A1B0GTK5 79 aa12.05□□□□□ -0.48
PCNX1-209ENST00000554879 FAM236CP0DP71 79 aa12.05□□□□□ -0.48
PCNX1-209ENST00000554879 SEC61GP60059 68 aa12.05□□□□□ -0.48
PCNX1-209ENST00000554879 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
PCNX1-209ENST00000554879 Q9HAA7 133 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
PCNX1-209ENST00000554879 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 A0A087WVE0 104 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 DAD1P61803 113 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
PCNX1-209ENST00000554879 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
PCNX1-209ENST00000554879 COL6A5A8TX70 2615 aa12.03□□□□□ -0.48
PCNX1-209ENST00000554879 CRYGDP07320 174 aa12.03□□□□□ -0.48
PCNX1-209ENST00000554879 DAZ2Q13117 558 aaKnown RBP12.03□□□□□ -0.48
PCNX1-209ENST00000554879 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
PCNX1-209ENST00000554879 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
PCNX1-209ENST00000554879 OXLD1Q5BKU9 147 aa12.02□□□□□ -0.48
PCNX1-209ENST00000554879 TMEM258P61165 79 aa12.02□□□□□ -0.49
PCNX1-209ENST00000554879 C1orf195Q5TG92 126 aa12.02□□□□□ -0.49
PCNX1-209ENST00000554879 SPANXCQ9NY87 97 aa12.02□□□□□ -0.49
PCNX1-209ENST00000554879 NXPH4O95158 308 aa12.02□□□□□ -0.49
PCNX1-209ENST00000554879 M0QY20 66 aa12.01□□□□□ -0.49
PCNX1-209ENST00000554879 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
PCNX1-209ENST00000554879 FAM19A4Q96LR4 140 aa12□□□□□ -0.49
PCNX1-209ENST00000554879 MGAM2Q2M2H8 2515 aa12□□□□□ -0.49
PCNX1-209ENST00000554879 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
PCNX1-209ENST00000554879 GHRHP01286 108 aa11.99□□□□□ -0.49
PCNX1-209ENST00000554879 SPANXDQ9BXN6 97 aa11.99□□□□□ -0.49
PCNX1-209ENST00000554879 STAB1Q9NY15 2570 aa11.99□□□□□ -0.49
PCNX1-209ENST00000554879 C14orf132Q9NPU4 83 aa11.99□□□□□ -0.49
PCNX1-209ENST00000554879 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.49
PCNX1-209ENST00000554879 ATP5G1P05496 136 aa11.98□□□□□ -0.49
PCNX1-209ENST00000554879 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
PCNX1-209ENST00000554879 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
PCNX1-209ENST00000554879 K7EQD1 137 aa11.97□□□□□ -0.49
PCNX1-209ENST00000554879 LEPROTO15243 131 aa11.97□□□□□ -0.49
PCNX1-209ENST00000554879 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
PCNX1-209ENST00000554879 IMUPQ9GZP8 106 aa11.97□□□□□ -0.49
PCNX1-209ENST00000554879 NSD1Q96L73 2696 aaPredicted RBP11.96□□□□□ -0.49
PCNX1-209ENST00000554879 SERP2Q8N6R1 65 aa11.96□□□□□ -0.49
PCNX1-209ENST00000554879 HAMPP81172 84 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 USP17L23D6RBM5 183 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 PAX4O43316 350 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 RPL18AQ02543 176 aaKnown RBP11.95□□□□□ -0.5
PCNX1-209ENST00000554879 MUC4Q99102 2169 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 A8MZ25 164 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
PCNX1-209ENST00000554879 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
PCNX1-209ENST00000554879 TRBV30A0A0K0K1B3 111 aa11.94□□□□□ -0.5
PCNX1-209ENST00000554879 GYPEP15421 78 aa11.94□□□□□ -0.5
PCNX1-209ENST00000554879 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
PCNX1-209ENST00000554879 KRTAP10-3P60369 221 aa11.93□□□□□ -0.5
PCNX1-209ENST00000554879 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
PCNX1-209ENST00000554879 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
PCNX1-209ENST00000554879 PRB2P02812 416 aaPredicted RBP11.93□□□□□ -0.5
PCNX1-209ENST00000554879 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
PCNX1-209ENST00000554879 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
PCNX1-209ENST00000554879 CRPP02741 224 aa11.93□□□□□ -0.5
PCNX1-209ENST00000554879 POLR2KP53803 58 aaKnown RBP11.92□□□□□ -0.5
PCNX1-209ENST00000554879 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
PCNX1-209ENST00000554879 PRO0628Q9UI54 55 aa11.92□□□□□ -0.5
PCNX1-209ENST00000554879 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
PCNX1-209ENST00000554879 NDUFC2O95298 119 aa11.91□□□□□ -0.5
PCNX1-209ENST00000554879 TRBV7-7A0A0K0K1E9 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms