RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CNFNQ9BYD5 112 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 PRO3102Q9H379 93 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 C1orf167Q5SNV9 1468 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 RAPGEF2Q9Y4G8 1499 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 POLR1AO95602 1720 aaPredicted RBP-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 ITSN1Q15811 1721 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 OVOS2A0A0J9YW53 1432 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 OVOS2Q6IE36 1432 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 C10orf71Q711Q0 1435 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 QRICH2Q9H0J4 1663 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 LRRC37A3O60309 1634 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 PTPN23Q9H3S7 1636 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 IBTKQ9P2D0 1353 aaPredicted RBP-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 XIRP1Q702N8 1843 aaKnown RBP-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 PAPPA2Q9BXP8 1791 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 CLPSL1A2RUU4 121 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 CFDP00746 253 aaPredicted RBP-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 MT1AP04731 61 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 UBE2D1P51668 147 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 B2MP61769 119 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 NCS1P62166 190 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 KRTAP19-2Q3LHN2 52 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 C9orf116Q5BN46 136 aaPredicted RBP-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 SPANXN1Q5VSR9 72 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 Q5VV11 94 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 SSBP3-AS1Q7Z2R9 100 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 UBE2DNLQ8IWF7 75 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 MMGT1Q8N4V1 131 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 WFDC6Q9BQY6 131 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 SAR1AQ9NR31 198 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 PI4KAP42356 2102 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 PPIP5K1Q6PFW1 1433 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 KIAA0556O60303 1618 aa-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.31□□□□□ -2.46
SCFD1-214ENST00000554819 NWD1Q149M9 1564 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 TULP4Q9NRJ4 1543 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 TOPAZ1Q8N9V7 1692 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 TRBV10-3A0A0K0K1G6 114 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 MT1EP04732 61 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 SPINK8P0C7L1 97 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 PIRTP0C851 137 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 SCGB1A1P11684 91 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 C10orf82Q8WW14 230 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 USF3Q68DE3 2245 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 USP32Q8NFA0 1604 aa-0.32□□□□□ -2.46
SCFD1-214ENST00000554819 LY75O60449 1722 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 NRXN2Q9P2S2 1712 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 NINQ8N4C6 2090 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PLXNA1Q9UIW2 1896 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 TOP2BQ02880 1626 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PREX2Q70Z35 1606 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 A0A0D9SFI3 127 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 FAM236AA0A1B0GUQ0 79 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 FAM236BA0A1B0GV22 79 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PITX3O75364 302 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 TSPAN19P0C672 248 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 IGLC6P0CF74 106 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 WFDC2Q14508 124 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 KLK9Q2XQG4 91 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 MIC13Q5XKP0 118 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 RPRMQ9NS64 109 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PRO0255Q9UI72 69 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 BCORQ6W2J9 1755 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 DISP2A7MBM2 1401 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PRG4Q92954 1404 aaPredicted RBP-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 A0A0G2JMZ2 1700 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 ANKRD26Q9UPS8 1709 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 TMEM2Q9UHN6 1383 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 FAM135AQ9P2D6 1515 aa-0.33□□□□□ -2.46
SCFD1-214ENST00000554819 PHIPQ8WWQ0 1821 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 GRIN2AQ12879 1464 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 TEX14Q8IWB6 1497 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 CC2D2AQ9P2K1 1620 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 TRAV1-2A0A0B4J238 106 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 M0R3E3 92 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 NCR2O95944 276 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 IFNA17P01571 189 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 DAPK1P53355 1430 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 HIST1H1AQ02539 215 aaPredicted RBP-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 EEA1Q15075 1411 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 DEFB121Q5J5C9 76 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 CDC42BPAQ5VT25 1732 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 DOT1LQ8TEK3 1739 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 ABCA3Q99758 1704 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 AIF1LQ9BQI0 150 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 MRPL40Q9NQ50 206 aaKnown RBP-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 MAST1Q9Y2H9 1570 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 MYH9P35579 1960 aaKnown RBP-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 KIF13AQ9H1H9 1805 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 CFAP43Q8NDM7 1665 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 MAPKBP1O60336 1514 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 CUX1P39880 1505 aa-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 SIPA1L3O60292 1781 aaPredicted RBP-0.34□□□□□ -2.46
SCFD1-214ENST00000554819 KIF14Q15058 1648 aa-0.35□□□□□ -2.46
SCFD1-214ENST00000554819 RNF17Q9BXT8 1623 aaKnown RBP-0.35□□□□□ -2.46
SCFD1-214ENST00000554819 RALGAPBQ86X10 1494 aa-0.35□□□□□ -2.46
SCFD1-214ENST00000554819 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 DNMBPQ6XZF7 1577 aa-0.35□□□□□ -2.47
SCFD1-214ENST00000554819 TROQ12816 1431 aaPredicted RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms