RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TOMM5Q8N4H5 51 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 FER1L6-AS1Q8NA97 138 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 OR5C1Q8NGR4 320 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 AP3S1Q92572 193 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 OTORQ9NRC9 128 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
ATXN3-217ENST00000553287 TRBV25-1A0A075B6N4 114 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-217ENST00000553287 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 IGHV1-24A0A0C4DH33 117 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 TRBV10-1A0A0K0K1A3 114 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 SH2D1AO60880 128 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 SIX6O95475 246 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 TCRAP04437 139 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 CRYGAP11844 174 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 S100A11P31949 105 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 XCL1P47992 114 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 MT1HP80294 61 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 FLI1Q01543 452 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-217ENST00000553287 RPL18AQ02543 176 aaKnown RBP2.03□□□□□ -2.08
ATXN3-217ENST00000553287 FAM19A5Q7Z5A7 132 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-217ENST00000553287 OR10AG1Q8NH19 301 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 CARD19Q96LW7 228 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 AQP10Q96PS8 301 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 SEC22CQ9BRL7 303 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 SMIM3Q9BZL3 60 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 LYRM2Q9NU23 88 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-217ENST00000553287 IL36BQ9NZH7 164 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 CBY1Q9Y3M2 126 aa2.03□□□□□ -2.08
ATXN3-217ENST00000553287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 A0A087WXM4 84 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 TRAV8-4A0A0B4J246 113 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 BPY2O14599 106 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 ATP6V1G2O95670 118 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 P01737 135 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 ARL14EPLP0DKL9 152 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 RPL12P30050 165 aaKnown RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 FAUP35544 74 aaKnown RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 NKX2-5P52952 324 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 RAB4BP61018 213 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 IQCJQ1A5X6 159 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 KHDC3LQ587J8 217 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 STX12Q86Y82 276 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 WDR61Q9GZS3 305 aaKnown RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 Q9H521 79 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 RSL24D1Q9UHA3 163 aaKnown RBP2.02□□□□□ -2.09
ATXN3-217ENST00000553287 ARL2-SNX15V9GYD0 113 aa2.02□□□□□ -2.09
ATXN3-217ENST00000553287 PIGBOS1A0A0B4J2F0 54 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 LOC107984640A0A0U1RRK4 108 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 FABP5P3A8MUU1 101 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.01□□□□□ -2.09
ATXN3-217ENST00000553287 CCL25O15444 150 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 NDUFB6O95139 128 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 MGPP08493 103 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 P0C880 135 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 TMBIM6P55061 237 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 UBE2G2P60604 165 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 HBG1P69891 147 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 HBG2P69892 147 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 FAM74A1Q5RGS3 127 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 ZFP82Q8N141 532 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 TMEM243Q9BU79 118 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 VCX3AQ9NNX9 186 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 LINC00474Q9P2X8 69 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 EPDR1Q9UM22 224 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 V9GYH0 126 aa2.01□□□□□ -2.09
ATXN3-217ENST00000553287 UBE2L6O14933 153 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 GZMBP10144 247 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 PVALBP20472 110 aaPredicted RBP2□□□□□ -2.09
ATXN3-217ENST00000553287 TAS2R45P59539 299 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 PKIAP61925 76 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 IL15RAQ13261 267 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 ATP6V1FQ16864 119 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
ATXN3-217ENST00000553287 Q86TA4 180 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 SLC7A5P1Q8MH63 180 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 C5orf17Q8NAS9 161 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 NUP35Q8NFH5 326 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 OR5A1Q8NGJ0 315 aa2□□□□□ -2.09
ATXN3-217ENST00000553287 IGHV1-58A0A0C4DH39 117 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 LINC00959A0A1B0GUT2 108 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 C17orf112F2Z3M2 114 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 M0QY20 66 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 APOMO95445 188 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 GCHFRP30047 84 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 AP3S2P59780 193 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 UBE2BP63146 152 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 RGS21Q2M5E4 152 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 ASB16-AS1Q495Z4 193 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 ORMDL2Q53FV1 153 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 SAPCD1Q5SSQ6 148 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 SPANXN1Q5VSR9 72 aa1.99□□□□□ -2.09
ATXN3-217ENST00000553287 AMMECR1LQ6DCA0 310 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms