RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 MYCBP2O75592 4640 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 A0A096LNI7 61 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
HDAC4-217ENST00000553145 Q6ZRU5 148 aa11.9□□□□□ -0.5
HDAC4-217ENST00000553145 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
HDAC4-217ENST00000553145 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
HDAC4-217ENST00000553145 K7EMI3 77 aa11.89□□□□□ -0.51
HDAC4-217ENST00000553145 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
HDAC4-217ENST00000553145 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
HDAC4-217ENST00000553145 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
HDAC4-217ENST00000553145 PLAC8Q9NZF1 115 aa11.89□□□□□ -0.51
HDAC4-217ENST00000553145 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
HDAC4-217ENST00000553145 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
HDAC4-217ENST00000553145 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
HDAC4-217ENST00000553145 ALKBH7Q9BT30 221 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-217ENST00000553145 IGIPA6NJ69 53 aa11.87□□□□□ -0.51
HDAC4-217ENST00000553145 APOMO95445 188 aa11.87□□□□□ -0.51
HDAC4-217ENST00000553145 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
HDAC4-217ENST00000553145 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
HDAC4-217ENST00000553145 APOC3P02656 99 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 UBE2D1P51668 147 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 COX19Q49B96 90 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 OR10D4PQ8NGN7 298 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 ORAOV1Q8WV07 137 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 C2orf48Q96LS8 159 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 AMELXQ99217 191 aa11.86□□□□□ -0.51
HDAC4-217ENST00000553145 MRPL18Q9H0U6 180 aaKnown RBP11.86□□□□□ -0.51
HDAC4-217ENST00000553145 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
HDAC4-217ENST00000553145 MT-ND6P03923 174 aa11.85□□□□□ -0.51
HDAC4-217ENST00000553145 HNRNPA3P51991 378 aaKnown RBP11.85□□□□□ -0.51
HDAC4-217ENST00000553145 Q6ZN92 141 aa11.84□□□□□ -0.51
HDAC4-217ENST00000553145 STPG4Q8N801 248 aa11.84□□□□□ -0.51
HDAC4-217ENST00000553145 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
HDAC4-217ENST00000553145 A0A087WZ39 114 aa11.83□□□□□ -0.52
HDAC4-217ENST00000553145 NPSP0C0P6 89 aa11.83□□□□□ -0.52
HDAC4-217ENST00000553145 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
HDAC4-217ENST00000553145 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
HDAC4-217ENST00000553145 PKHD1L1Q86WI1 4243 aa11.83□□□□□ -0.52
HDAC4-217ENST00000553145 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
HDAC4-217ENST00000553145 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
HDAC4-217ENST00000553145 VCX2Q9H322 139 aa11.82□□□□□ -0.52
HDAC4-217ENST00000553145 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
HDAC4-217ENST00000553145 LOC107984640A0A0U1RRK4 108 aa11.81□□□□□ -0.52
HDAC4-217ENST00000553145 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-217ENST00000553145 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
HDAC4-217ENST00000553145 SVBPQ8N300 66 aa11.81□□□□□ -0.52
HDAC4-217ENST00000553145 TIMM17AQ99595 171 aa11.81□□□□□ -0.52
HDAC4-217ENST00000553145 LINC00474Q9P2X8 69 aa11.81□□□□□ -0.52
HDAC4-217ENST00000553145 SNAPINO95295 136 aa11.8□□□□□ -0.52
HDAC4-217ENST00000553145 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
HDAC4-217ENST00000553145 NDUFA5Q16718 116 aa11.8□□□□□ -0.52
HDAC4-217ENST00000553145 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
HDAC4-217ENST00000553145 HERC1Q15751 4861 aa11.8□□□□□ -0.52
HDAC4-217ENST00000553145 G0S2P27469 103 aa11.79□□□□□ -0.52
HDAC4-217ENST00000553145 KIAA0087Q14695 138 aa11.79□□□□□ -0.52
HDAC4-217ENST00000553145 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
HDAC4-217ENST00000553145 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-217ENST00000553145 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
HDAC4-217ENST00000553145 UNQ6190/PRO20217Q6UXQ8 127 aa11.78□□□□□ -0.52
HDAC4-217ENST00000553145 ERASQ7Z444 233 aa11.78□□□□□ -0.52
HDAC4-217ENST00000553145 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
HDAC4-217ENST00000553145 MRPL35Q9NZE8 188 aaKnown RBP11.78□□□□□ -0.52
HDAC4-217ENST00000553145 KRTAP29-1A8MX34 341 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-217ENST00000553145 F8WDY8 70 aa11.77□□□□□ -0.53
HDAC4-217ENST00000553145 NDUFA1O15239 70 aa11.77□□□□□ -0.53
HDAC4-217ENST00000553145 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
HDAC4-217ENST00000553145 RPL18AQ02543 176 aaKnown RBP11.76□□□□□ -0.53
HDAC4-217ENST00000553145 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 FA2HQ7L5A8 372 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 YPEL4Q96NS1 127 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 C6orf48Q9UBA6 75 aa11.76□□□□□ -0.53
HDAC4-217ENST00000553145 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
HDAC4-217ENST00000553145 C18orf32Q8TCD1 76 aa11.75□□□□□ -0.53
HDAC4-217ENST00000553145 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 A0A1W2PNN7 141 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 J3QL48 77 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 SMCO4Q9NRQ5 59 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
HDAC4-217ENST00000553145 A0A096LNJ9 63 aa11.73□□□□□ -0.53
HDAC4-217ENST00000553145 HERVK_113P63121 156 aa11.73□□□□□ -0.53
HDAC4-217ENST00000553145 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
HDAC4-217ENST00000553145 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.53
HDAC4-217ENST00000553145 SEC11AP67812 179 aa11.71□□□□□ -0.53
HDAC4-217ENST00000553145 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
HDAC4-217ENST00000553145 C9orf116Q5BN46 136 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-217ENST00000553145 Q6ZRP5 223 aa11.71□□□□□ -0.53
HDAC4-217ENST00000553145 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
HDAC4-217ENST00000553145 TOMM7Q9P0U1 55 aa11.7□□□□□ -0.54
HDAC4-217ENST00000553145 CST9LQ9H4G1 147 aa11.69□□□□□ -0.54
HDAC4-217ENST00000553145 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
HDAC4-217ENST00000553145 OXTP01178 125 aa11.68□□□□□ -0.54
HDAC4-217ENST00000553145 PRSS2P07478 247 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms