RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 ALG5Q9Y673 324 aa5.74□□□□□ -1.49
TROAP-209ENST00000549275 IGKV2D-26A0A0A0MRZ7 120 aa5.73□□□□□ -1.49
TROAP-209ENST00000549275 DEFA1P59665 94 aa5.73□□□□□ -1.49
TROAP-209ENST00000549275 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
TROAP-209ENST00000549275 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
TROAP-209ENST00000549275 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 C7orf77A4D0Y5 90 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 UMAD1C9J7I0 102 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 RPL28P46779 137 aaKnown RBP5.72□□□□□ -1.49
TROAP-209ENST00000549275 SFT2D1Q8WV19 159 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 C11orf52Q96A22 123 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 SMDT1Q9H4I9 107 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 ST20Q9HBF5 79 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 UBE2D4Q9Y2X8 147 aa5.72□□□□□ -1.49
TROAP-209ENST00000549275 C5orf38Q86SI9 138 aa5.71□□□□□ -1.5
TROAP-209ENST00000549275 KCNRGQ8N5I3 272 aa5.71□□□□□ -1.5
TROAP-209ENST00000549275 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
TROAP-209ENST00000549275 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 CCL20P78556 96 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 GAGE2EQ4V326 116 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 LBHQ53QV2 105 aaPredicted RBP5.7□□□□□ -1.5
TROAP-209ENST00000549275 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 GAGE2DQ9UEU5 116 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
TROAP-209ENST00000549275 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 GIPP09681 153 aaPredicted RBP5.69□□□□□ -1.5
TROAP-209ENST00000549275 GNG4P50150 75 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 POLR2KP53803 58 aaKnown RBP5.69□□□□□ -1.5
TROAP-209ENST00000549275 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 ORAOV1Q8WV07 137 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 TMEM18Q96B42 140 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 TIMM21Q9BVV7 248 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 MANBALQ9NQG1 85 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 TMEM242Q9NWH2 141 aa5.69□□□□□ -1.5
TROAP-209ENST00000549275 RAB19A4D1S5 217 aa5.68□□□□□ -1.5
TROAP-209ENST00000549275 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
TROAP-209ENST00000549275 VCYO14598 125 aa5.68□□□□□ -1.5
TROAP-209ENST00000549275 PPP1R17O96001 155 aa5.68□□□□□ -1.5
TROAP-209ENST00000549275 C6orf48Q9UBA6 75 aa5.68□□□□□ -1.5
TROAP-209ENST00000549275 FXYD6-FXYD2A0A087WZ82 144 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 H2AFB1P0C5Y9 115 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 FCER1GP30273 86 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 IFITM3Q01628 133 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 CTDSP1Q9GZU7 261 aa5.67□□□□□ -1.5
TROAP-209ENST00000549275 IGHV3OR16-9A0A0B4J2B5 98 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 BCE1O60756 84 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 Q5BKY6 102 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 TP73-AS1Q9UF72 201 aa5.66□□□□□ -1.5
TROAP-209ENST00000549275 TCAPO15273 167 aa5.65□□□□□ -1.5
TROAP-209ENST00000549275 PDE6DO43924 150 aa5.65□□□□□ -1.5
TROAP-209ENST00000549275 C4orf48Q5BLP8 95 aa5.65□□□□□ -1.5
TROAP-209ENST00000549275 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
TROAP-209ENST00000549275 PACRGQ96M98 296 aaPredicted RBP5.65□□□□□ -1.5
TROAP-209ENST00000549275 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
TROAP-209ENST00000549275 C9orf129Q5T035 196 aaKnown RBP5.64□□□□□ -1.51
TROAP-209ENST00000549275 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
TROAP-209ENST00000549275 A0A1B0GV50 99 aa5.63□□□□□ -1.51
TROAP-209ENST00000549275 RGS21Q2M5E4 152 aa5.63□□□□□ -1.51
TROAP-209ENST00000549275 BORCS7Q96B45 105 aa5.63□□□□□ -1.51
TROAP-209ENST00000549275 ANAPC16Q96DE5 110 aa5.63□□□□□ -1.51
TROAP-209ENST00000549275 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
TROAP-209ENST00000549275 TGIF2-C20orf24A0A0A6YYL0 155 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 A8MWL6 223 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 PPP1R2P9O14990 202 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 MT2AP02795 61 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
TROAP-209ENST00000549275 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 TMEM191AQ9H0A3 160 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 SPANXA1Q9NS26 97 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 MED9Q9NWA0 146 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 GNG13Q9P2W3 67 aa5.62□□□□□ -1.51
TROAP-209ENST00000549275 ZNF727A8MUV8 499 aa5.61□□□□□ -1.51
TROAP-209ENST00000549275 MRPS36P82909 103 aaKnown RBP5.61□□□□□ -1.51
TROAP-209ENST00000549275 RNASE13Q5GAN3 156 aaKnown RBP5.61□□□□□ -1.51
TROAP-209ENST00000549275 Q6ZUT4 128 aa5.61□□□□□ -1.51
TROAP-209ENST00000549275 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
TROAP-209ENST00000549275 FAM19A2Q8N3H0 131 aa5.61□□□□□ -1.51
TROAP-209ENST00000549275 TRBV20OR9-2A0A075B6H5 130 aa5.6□□□□□ -1.51
TROAP-209ENST00000549275 ARPC5O15511 151 aa5.6□□□□□ -1.51
TROAP-209ENST00000549275 TAGLN2P37802 199 aaKnown RBP5.6□□□□□ -1.51
TROAP-209ENST00000549275 SUMO2P61956 95 aaKnown RBP5.6□□□□□ -1.51
TROAP-209ENST00000549275 HBBP68871 147 aa5.6□□□□□ -1.51
TROAP-209ENST00000549275 ZNF345Q14585 488 aa5.6□□□□□ -1.51
TROAP-209ENST00000549275 CT83Q5H943 113 aa5.6□□□□□ -1.51
TROAP-209ENST00000549275 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
TROAP-209ENST00000549275 RAB4AP20338 218 aa5.59□□□□□ -1.51
TROAP-209ENST00000549275 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
TROAP-209ENST00000549275 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
TROAP-209ENST00000549275 A0A1B0GUT8 65 aa5.58□□□□□ -1.52
TROAP-209ENST00000549275 GATCO43716 136 aaKnown RBP5.58□□□□□ -1.52
TROAP-209ENST00000549275 SPINK1P00995 79 aa5.58□□□□□ -1.52
TROAP-209ENST00000549275 UBE2AP49459 152 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms