RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
HDAC7-227ENST00000548080 Q8N3U1 123 aa11.75□□□□□ -0.53
HDAC7-227ENST00000548080 GEMIN7Q9H840 131 aaKnown RBP11.75□□□□□ -0.53
HDAC7-227ENST00000548080 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
HDAC7-227ENST00000548080 ANGP03950 147 aaKnown RBP11.74□□□□□ -0.53
HDAC7-227ENST00000548080 TSTD3H0UI37 97 aa11.73□□□□□ -0.53
HDAC7-227ENST00000548080 HERVK_113P63121 156 aa11.73□□□□□ -0.53
HDAC7-227ENST00000548080 LINC00269Q8N2A0 174 aa11.73□□□□□ -0.53
HDAC7-227ENST00000548080 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 HERVK_113P61574 105 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 COX6A2Q02221 97 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
HDAC7-227ENST00000548080 LINC00959A0A1B0GUT2 108 aa11.71□□□□□ -0.53
HDAC7-227ENST00000548080 TTC32Q5I0X7 151 aa11.71□□□□□ -0.53
HDAC7-227ENST00000548080 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
HDAC7-227ENST00000548080 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 CCL25O15444 150 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 REG3AQ06141 175 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 SS18Q15532 418 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 C6orf223Q8N319 242 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 EPPK1P58107 5090 aaKnown RBP11.7□□□□□ -0.54
HDAC7-227ENST00000548080 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 TMEM223A0PJW6 202 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 E9PLD3 99 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
HDAC7-227ENST00000548080 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
HDAC7-227ENST00000548080 H3BRM9 83 aa11.69□□□□□ -0.54
HDAC7-227ENST00000548080 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
HDAC7-227ENST00000548080 NMUP48645 174 aa11.69□□□□□ -0.54
HDAC7-227ENST00000548080 CDKN2A-AS1Q9UH64 79 aa11.69□□□□□ -0.54
HDAC7-227ENST00000548080 PCP4L1A6NKN8 68 aa11.68□□□□□ -0.54
HDAC7-227ENST00000548080 COX8AP10176 69 aa11.68□□□□□ -0.54
HDAC7-227ENST00000548080 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
HDAC7-227ENST00000548080 PRR34Q9NV39 138 aa11.68□□□□□ -0.54
HDAC7-227ENST00000548080 UQCR10Q9UDW1 63 aa11.68□□□□□ -0.54
HDAC7-227ENST00000548080 FAT2Q9NYQ8 4349 aa11.67□□□□□ -0.54
HDAC7-227ENST00000548080 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
HDAC7-227ENST00000548080 SPINK8P0C7L1 97 aa11.65□□□□□ -0.54
HDAC7-227ENST00000548080 ENHOQ6UWT2 76 aa11.65□□□□□ -0.54
HDAC7-227ENST00000548080 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
HDAC7-227ENST00000548080 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
HDAC7-227ENST00000548080 LEPROTO15243 131 aa11.64□□□□□ -0.55
HDAC7-227ENST00000548080 CRPP02741 224 aa11.64□□□□□ -0.55
HDAC7-227ENST00000548080 XCL1P47992 114 aa11.64□□□□□ -0.55
HDAC7-227ENST00000548080 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
HDAC7-227ENST00000548080 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 DLEU1O43261 78 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 TNP2Q05952 138 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-227ENST00000548080 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 Q9HAA7 133 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 TRAV8-3A0A0A6YYJ7 113 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 DDTP30046 118 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
HDAC7-227ENST00000548080 IGLV10-54A0A075B6I4 117 aa11.62□□□□□ -0.55
HDAC7-227ENST00000548080 J3QQQ9 107 aa11.62□□□□□ -0.55
HDAC7-227ENST00000548080 TTTY13Q9BZ97 58 aa11.62□□□□□ -0.55
HDAC7-227ENST00000548080 A0A087WZ39 114 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
HDAC7-227ENST00000548080 MIAQ16674 131 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 Q6ZRN7 208 aaPredicted RBP11.61□□□□□ -0.55
HDAC7-227ENST00000548080 C5orf38Q86SI9 138 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
HDAC7-227ENST00000548080 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
HDAC7-227ENST00000548080 LINC01561Q8N1V8 128 aa11.6□□□□□ -0.55
HDAC7-227ENST00000548080 TP73-AS1Q9UF72 201 aa11.6□□□□□ -0.55
HDAC7-227ENST00000548080 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
HDAC7-227ENST00000548080 MYMXA0A1B0GTQ4 84 aa11.58□□□□□ -0.56
HDAC7-227ENST00000548080 A0A1B0GVY2 172 aa11.58□□□□□ -0.56
HDAC7-227ENST00000548080 GAGE12HA6NDE8 117 aa11.58□□□□□ -0.56
HDAC7-227ENST00000548080 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
HDAC7-227ENST00000548080 FOXI1Q12951 378 aa11.58□□□□□ -0.56
HDAC7-227ENST00000548080 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
HDAC7-227ENST00000548080 COX7A2LO14548 114 aa11.57□□□□□ -0.56
HDAC7-227ENST00000548080 PKD1P98161 4303 aa11.57□□□□□ -0.56
HDAC7-227ENST00000548080 K7EP13 123 aa11.57□□□□□ -0.56
HDAC7-227ENST00000548080 C2orf91Q6ZV80 131 aa11.56□□□□□ -0.56
HDAC7-227ENST00000548080 MALP21145 153 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 KRTAP26-1Q6PEX3 210 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 NDUFA12Q9UI09 145 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
HDAC7-227ENST00000548080 HIGD1BQ9P298 99 aa11.53□□□□□ -0.56
HDAC7-227ENST00000548080 LINC00587B1AMM8 73 aa11.52□□□□□ -0.56
HDAC7-227ENST00000548080 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms