RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SETXQ7Z333 2677 aaKnown RBP10.8□□□□□ -0.68
CNN3-207ENST00000545882 COX7A2LO14548 114 aa10.8□□□□□ -0.68
CNN3-207ENST00000545882 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
CNN3-207ENST00000545882 FLNAP21333 2647 aaKnown RBP10.79□□□□□ -0.68
CNN3-207ENST00000545882 PLA2G2AP14555 144 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 GAGE2BQ13066 116 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 TMEM243Q9BU79 118 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 NF1P21359 2839 aa10.79□□□□□ -0.68
CNN3-207ENST00000545882 GAGE7O76087 117 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 HERV-K104P63124 156 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 Q6Q795 121 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
CNN3-207ENST00000545882 C16orf74Q96GX8 76 aa10.77□□□□□ -0.69
CNN3-207ENST00000545882 UBE2L6O14933 153 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
CNN3-207ENST00000545882 COPS9Q8WXC6 57 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 OVOL2Q9BRP0 275 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 ANK3Q12955 4377 aaKnown RBP10.76□□□□□ -0.69
CNN3-207ENST00000545882 TRBV6-4A0A1B0GX49 114 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
CNN3-207ENST00000545882 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
CNN3-207ENST00000545882 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
CNN3-207ENST00000545882 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
CNN3-207ENST00000545882 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
CNN3-207ENST00000545882 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
CNN3-207ENST00000545882 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
CNN3-207ENST00000545882 JMJD1CQ15652 2540 aa10.75□□□□□ -0.69
CNN3-207ENST00000545882 IGLV1-51P01701 117 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 IGLV4-60A0A075B6I1 120 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
CNN3-207ENST00000545882 GAGE6Q13070 117 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
CNN3-207ENST00000545882 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
CNN3-207ENST00000545882 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
CNN3-207ENST00000545882 FHL2Q14192 279 aa10.73□□□□□ -0.69
CNN3-207ENST00000545882 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
CNN3-207ENST00000545882 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
CNN3-207ENST00000545882 TRACP01848 142 aa10.72□□□□□ -0.69
CNN3-207ENST00000545882 IGKV2-28A0A075B6P5 120 aa10.71□□□□□ -0.69
CNN3-207ENST00000545882 TRGV4A0A0C4DH28 118 aa10.71□□□□□ -0.69
CNN3-207ENST00000545882 IGKV2D-28P01615 120 aa10.71□□□□□ -0.69
CNN3-207ENST00000545882 MIR7-3HGQ8N6C7 128 aa10.71□□□□□ -0.69
CNN3-207ENST00000545882 KMT2BQ9UMN6 2715 aaPredicted RBP10.7□□□□□ -0.7
CNN3-207ENST00000545882 J3QKU1 62 aa10.7□□□□□ -0.7
CNN3-207ENST00000545882 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
CNN3-207ENST00000545882 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
CNN3-207ENST00000545882 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
CNN3-207ENST00000545882 IGKV3OR2-268A0A0C4DH90 116 aa10.7□□□□□ -0.7
CNN3-207ENST00000545882 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
CNN3-207ENST00000545882 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
CNN3-207ENST00000545882 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
CNN3-207ENST00000545882 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
CNN3-207ENST00000545882 SETD2Q9BYW2 2564 aaPredicted RBP10.67□□□□□ -0.7
CNN3-207ENST00000545882 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
CNN3-207ENST00000545882 PF4P02776 101 aa10.67□□□□□ -0.7
CNN3-207ENST00000545882 HILS1P60008 231 aa10.67□□□□□ -0.7
CNN3-207ENST00000545882 SND1-IT1Q9HBX3 110 aa10.67□□□□□ -0.7
CNN3-207ENST00000545882 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 A0A087WZ39 114 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 CCDC179H3BU77 68 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 CCL18P55774 89 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 SMCR5Q8TEV8 140 aa10.66□□□□□ -0.7
CNN3-207ENST00000545882 CRPP02741 224 aa10.65□□□□□ -0.7
CNN3-207ENST00000545882 ACYP1P07311 99 aa10.65□□□□□ -0.7
CNN3-207ENST00000545882 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
CNN3-207ENST00000545882 ITPR2Q14571 2701 aa10.65□□□□□ -0.7
CNN3-207ENST00000545882 ACANP16112 2415 aa10.65□□□□□ -0.71
CNN3-207ENST00000545882 LINC00158P58513 81 aa10.64□□□□□ -0.71
CNN3-207ENST00000545882 Q9HAA7 133 aa10.64□□□□□ -0.71
CNN3-207ENST00000545882 B5MCH6 92 aa10.64□□□□□ -0.71
CNN3-207ENST00000545882 SMIM11BQ8TCY0 68 aa10.64□□□□□ -0.71
CNN3-207ENST00000545882 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
CNN3-207ENST00000545882 SDIM1Q6ZPB5 146 aa10.63□□□□□ -0.71
CNN3-207ENST00000545882 UNC79Q9P2D8 2635 aa10.63□□□□□ -0.71
CNN3-207ENST00000545882 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
CNN3-207ENST00000545882 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
CNN3-207ENST00000545882 A0A087WYN8 130 aa10.62□□□□□ -0.71
CNN3-207ENST00000545882 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
CNN3-207ENST00000545882 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
CNN3-207ENST00000545882 MALP21145 153 aa10.61□□□□□ -0.71
CNN3-207ENST00000545882 SS18L2Q9UHA2 77 aa10.61□□□□□ -0.71
CNN3-207ENST00000545882 HELZ2Q9BYK8 2649 aaKnown RBP10.61□□□□□ -0.71
CNN3-207ENST00000545882 PFN2P35080 140 aa10.6□□□□□ -0.71
CNN3-207ENST00000545882 KIR2DL5BQ8NHK3 375 aa10.6□□□□□ -0.71
CNN3-207ENST00000545882 KRTAP10-3P60369 221 aa10.6□□□□□ -0.71
CNN3-207ENST00000545882 MTORP42345 2549 aa10.6□□□□□ -0.71
CNN3-207ENST00000545882 GYPEP15421 78 aa10.58□□□□□ -0.72
CNN3-207ENST00000545882 C9orf129Q5T035 196 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms