RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 F8WDY8 70 aa9.04□□□□□ -0.96
COL4A6-209ENST00000545689 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
COL4A6-209ENST00000545689 COX7CP15954 63 aa9.04□□□□□ -0.96
COL4A6-209ENST00000545689 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
COL4A6-209ENST00000545689 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
COL4A6-209ENST00000545689 EDN2P20800 178 aa9.03□□□□□ -0.96
COL4A6-209ENST00000545689 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.96
COL4A6-209ENST00000545689 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
COL4A6-209ENST00000545689 IGKV4-1P06312 121 aa9.02□□□□□ -0.97
COL4A6-209ENST00000545689 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
COL4A6-209ENST00000545689 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.97
COL4A6-209ENST00000545689 PRM2P04554 102 aa9.01□□□□□ -0.97
COL4A6-209ENST00000545689 V9GYY9 64 aa9.01□□□□□ -0.97
COL4A6-209ENST00000545689 ADAMTS20P59510 1910 aa9.01□□□□□ -0.97
COL4A6-209ENST00000545689 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-209ENST00000545689 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
COL4A6-209ENST00000545689 CYSRT1A8MQ03 144 aa9□□□□□ -0.97
COL4A6-209ENST00000545689 SEC61GP60059 68 aa9□□□□□ -0.97
COL4A6-209ENST00000545689 FHL2Q14192 279 aa9□□□□□ -0.97
COL4A6-209ENST00000545689 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
COL4A6-209ENST00000545689 EML5Q05BV3 1969 aa9□□□□□ -0.97
COL4A6-209ENST00000545689 Q8N814 137 aa8.99□□□□□ -0.97
COL4A6-209ENST00000545689 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
COL4A6-209ENST00000545689 A0A1W2PPR1 153 aa8.99□□□□□ -0.97
COL4A6-209ENST00000545689 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
COL4A6-209ENST00000545689 COX6A2Q02221 97 aa8.99□□□□□ -0.97
COL4A6-209ENST00000545689 IGHV4-30-4P0DP06 118 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 PLA2G2AP14555 144 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 A0A1B0GUV1 79 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 OTOGLQ3ZCN5 2332 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 FAM208BQ5VWN6 2430 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 PRB2P02812 416 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-209ENST00000545689 NTM-AS1Q6ZSK4 140 aa8.98□□□□□ -0.97
COL4A6-209ENST00000545689 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
COL4A6-209ENST00000545689 HIVEP2P31629 2446 aa8.97□□□□□ -0.97
COL4A6-209ENST00000545689 COL4A2P08572 1712 aa8.97□□□□□ -0.97
COL4A6-209ENST00000545689 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
COL4A6-209ENST00000545689 BRK1Q8WUW1 75 aa8.96□□□□□ -0.97
COL4A6-209ENST00000545689 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.97
COL4A6-209ENST00000545689 MRPL55Q7Z7F7 128 aaKnown RBP8.96□□□□□ -0.98
COL4A6-209ENST00000545689 LINC00694P0DN24 101 aa8.96□□□□□ -0.98
COL4A6-209ENST00000545689 TANC2Q9HCD6 1990 aa8.96□□□□□ -0.98
COL4A6-209ENST00000545689 RAI1Q7Z5J4 1906 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-209ENST00000545689 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
COL4A6-209ENST00000545689 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
COL4A6-209ENST00000545689 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 Q8N2B8 174 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 UNQ6190/PRO20217Q6UXQ8 127 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 WFDC10BQ8IUB3 73 aa8.94□□□□□ -0.98
COL4A6-209ENST00000545689 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-209ENST00000545689 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
COL4A6-209ENST00000545689 PRR14LQ5THK1 2151 aa8.93□□□□□ -0.98
COL4A6-209ENST00000545689 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
COL4A6-209ENST00000545689 TTC28Q96AY4 2481 aa8.93□□□□□ -0.98
COL4A6-209ENST00000545689 C2orf48Q96LS8 159 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 A0A096LNI7 61 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 NANOS2P60321 138 aaKnown RBP8.92□□□□□ -0.98
COL4A6-209ENST00000545689 KRTAP10-9P60411 292 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 Q6ZSN1 163 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 A0A087WYN8 130 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 CASC2Q6XLA1 102 aa8.92□□□□□ -0.98
COL4A6-209ENST00000545689 PTPRQQ9UMZ3 2332 aa8.91□□□□□ -0.98
COL4A6-209ENST00000545689 TRBV10-3A0A0K0K1G6 114 aa8.91□□□□□ -0.98
COL4A6-209ENST00000545689 PLXNB1O43157 2135 aa8.91□□□□□ -0.98
COL4A6-209ENST00000545689 PLAC8L1A1L4L8 177 aa8.91□□□□□ -0.98
COL4A6-209ENST00000545689 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
COL4A6-209ENST00000545689 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.98
COL4A6-209ENST00000545689 DSCAML1Q8TD84 2053 aa8.9□□□□□ -0.99
COL4A6-209ENST00000545689 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.99
COL4A6-209ENST00000545689 IGLV5-39A0A0G2JS06 123 aa8.89□□□□□ -0.99
COL4A6-209ENST00000545689 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
COL4A6-209ENST00000545689 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
COL4A6-209ENST00000545689 SNURFQ9Y675 71 aa8.88□□□□□ -0.99
COL4A6-209ENST00000545689 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
COL4A6-209ENST00000545689 ACACBO00763 2458 aa8.87□□□□□ -0.99
COL4A6-209ENST00000545689 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
COL4A6-209ENST00000545689 PRYO14603 147 aa8.87□□□□□ -0.99
COL4A6-209ENST00000545689 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
COL4A6-209ENST00000545689 LINC00315P59091 139 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 C9orf116Q5BN46 136 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-209ENST00000545689 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 C1orf137Q5JT78 98 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 NAV3Q8IVL0 2385 aa8.86□□□□□ -0.99
COL4A6-209ENST00000545689 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
COL4A6-209ENST00000545689 LINC00575Q6W349 94 aa8.85□□□□□ -0.99
COL4A6-209ENST00000545689 SMIM26A0A096LP01 95 aa8.84□□□□□ -0.99
COL4A6-209ENST00000545689 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
COL4A6-209ENST00000545689 IGLV5-45A0A087WSX0 123 aa8.83□□□□□ -1
COL4A6-209ENST00000545689 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
COL4A6-209ENST00000545689 Q6ZTC4 211 aa8.82□□□□□ -1
COL4A6-209ENST00000545689 Q8N9L7 120 aa8.82□□□□□ -1
COL4A6-209ENST00000545689 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
COL4A6-209ENST00000545689 C6orf223Q8N319 242 aa8.81□□□□□ -1
COL4A6-209ENST00000545689 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
COL4A6-209ENST00000545689 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
COL4A6-209ENST00000545689 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms