RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 MT-ND6P03923 174 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
DDX55-213ENST00000545042 TEX43Q6ZNM6 134 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 C2orf88Q9BSF0 95 aa8.48□□□□□ -1.05
DDX55-213ENST00000545042 TGIF2-C20orf24A0A0A6YYL0 155 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 PANO1I0J062 215 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 APOC3P02656 99 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
DDX55-213ENST00000545042 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 SNAPINO95295 136 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 NPSP0C0P6 89 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 SVBPQ8N300 66 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 CAMK2N2Q96S95 79 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 VCX2Q9H322 139 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.06
DDX55-213ENST00000545042 A0A087WYN8 130 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
DDX55-213ENST00000545042 SPAG11BQ08648 103 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 FABP9Q0Z7S8 132 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 C2orf48Q96LS8 159 aa8.45□□□□□ -1.06
DDX55-213ENST00000545042 MRPL18Q9H0U6 180 aaKnown RBP8.45□□□□□ -1.06
DDX55-213ENST00000545042 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
DDX55-213ENST00000545042 ALKBH7Q9BT30 221 aaPredicted RBP8.44□□□□□ -1.06
DDX55-213ENST00000545042 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 F8WDY8 70 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 Q6ZRU5 148 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 SMCO4Q9NRQ5 59 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
DDX55-213ENST00000545042 A0A087WZ39 114 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 A0A096LNI7 61 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 UBE2D1P51668 147 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 AMELXQ99217 191 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
DDX55-213ENST00000545042 SEC11AP67812 179 aa8.41□□□□□ -1.06
DDX55-213ENST00000545042 STPG4Q8N801 248 aa8.41□□□□□ -1.06
DDX55-213ENST00000545042 SCGB3A1Q96QR1 104 aa8.41□□□□□ -1.06
DDX55-213ENST00000545042 NDUFA1O15239 70 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 GAGE2BQ13066 116 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 ERASQ7Z444 233 aa8.4□□□□□ -1.06
DDX55-213ENST00000545042 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.07
DDX55-213ENST00000545042 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
DDX55-213ENST00000545042 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
DDX55-213ENST00000545042 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
DDX55-213ENST00000545042 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
DDX55-213ENST00000545042 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
DDX55-213ENST00000545042 HERVK_113P63121 156 aa8.38□□□□□ -1.07
DDX55-213ENST00000545042 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
DDX55-213ENST00000545042 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
DDX55-213ENST00000545042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.37□□□□□ -1.07
DDX55-213ENST00000545042 PRSS2P07478 247 aa8.37□□□□□ -1.07
DDX55-213ENST00000545042 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
DDX55-213ENST00000545042 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
DDX55-213ENST00000545042 J3QL48 77 aa8.36□□□□□ -1.07
DDX55-213ENST00000545042 PACRGQ96M98 296 aaPredicted RBP8.36□□□□□ -1.07
DDX55-213ENST00000545042 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
DDX55-213ENST00000545042 RAB5BP61020 215 aa8.35□□□□□ -1.07
DDX55-213ENST00000545042 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
DDX55-213ENST00000545042 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
DDX55-213ENST00000545042 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
DDX55-213ENST00000545042 LINC00614P0C842 121 aa8.34□□□□□ -1.07
DDX55-213ENST00000545042 KIAA0087Q14695 138 aa8.34□□□□□ -1.07
DDX55-213ENST00000545042 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
DDX55-213ENST00000545042 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
DDX55-213ENST00000545042 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
DDX55-213ENST00000545042 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
DDX55-213ENST00000545042 CKS1BP61024 79 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 PMVKQ15126 192 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 LINC00469Q8N7U9 141 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 CST9LQ9H4G1 147 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 CDKN2A-AS1Q9UH64 79 aa8.33□□□□□ -1.08
DDX55-213ENST00000545042 HBDP02042 147 aa8.32□□□□□ -1.08
DDX55-213ENST00000545042 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
DDX55-213ENST00000545042 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
DDX55-213ENST00000545042 Q8IZM0 81 aa8.32□□□□□ -1.08
DDX55-213ENST00000545042 OXTP01178 125 aa8.31□□□□□ -1.08
DDX55-213ENST00000545042 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
DDX55-213ENST00000545042 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms