RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 RAB5BP61020 215 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 Q6ZSA8 131 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 SCGB3A1Q96QR1 104 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
LTBR-213ENST00000544454 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
LTBR-213ENST00000544454 APOMO95445 188 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 UBE2D1P51668 147 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 URB1-AS1Q96HZ7 61 aa8.85□□□□□ -0.99
LTBR-213ENST00000544454 COLCA2A8K830 154 aa8.84□□□□□ -0.99
LTBR-213ENST00000544454 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
LTBR-213ENST00000544454 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
LTBR-213ENST00000544454 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
LTBR-213ENST00000544454 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
LTBR-213ENST00000544454 A0A087WZ39 114 aa8.82□□□□□ -1
LTBR-213ENST00000544454 TRGC2P03986 189 aa8.82□□□□□ -1
LTBR-213ENST00000544454 SEC11AP67812 179 aa8.82□□□□□ -1
LTBR-213ENST00000544454 COX6A2Q02221 97 aa8.82□□□□□ -1
LTBR-213ENST00000544454 Q8N1X5 172 aa8.82□□□□□ -1
LTBR-213ENST00000544454 CHAC1Q9BUX1 264 aa8.82□□□□□ -1
LTBR-213ENST00000544454 FAT1Q14517 4588 aa8.81□□□□□ -1
LTBR-213ENST00000544454 A0A096LNJ9 63 aa8.81□□□□□ -1
LTBR-213ENST00000544454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
LTBR-213ENST00000544454 HBDP02042 147 aa8.81□□□□□ -1
LTBR-213ENST00000544454 LINC01561Q8N1V8 128 aa8.81□□□□□ -1
LTBR-213ENST00000544454 OR10D4PQ8NGN7 298 aa8.81□□□□□ -1
LTBR-213ENST00000544454 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
LTBR-213ENST00000544454 LINC00526Q96FQ7 95 aa8.81□□□□□ -1
LTBR-213ENST00000544454 C2orf48Q96LS8 159 aa8.81□□□□□ -1
LTBR-213ENST00000544454 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
LTBR-213ENST00000544454 HERVK_113P63121 156 aa8.8□□□□□ -1
LTBR-213ENST00000544454 SYCNQ0VAF6 134 aa8.8□□□□□ -1
LTBR-213ENST00000544454 CST9LQ9H4G1 147 aa8.8□□□□□ -1
LTBR-213ENST00000544454 F8WDY8 70 aa8.79□□□□□ -1
LTBR-213ENST00000544454 HAMPP81172 84 aa8.79□□□□□ -1
LTBR-213ENST00000544454 SPAG11BQ08648 103 aa8.79□□□□□ -1
LTBR-213ENST00000544454 PMVKQ15126 192 aa8.79□□□□□ -1
LTBR-213ENST00000544454 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
LTBR-213ENST00000544454 ORAOV1Q8WV07 137 aa8.79□□□□□ -1
LTBR-213ENST00000544454 CARD19Q96LW7 228 aa8.79□□□□□ -1
LTBR-213ENST00000544454 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
LTBR-213ENST00000544454 ATP5LO75964 103 aa8.78□□□□□ -1
LTBR-213ENST00000544454 PMCHL1Q16048 86 aa8.78□□□□□ -1
LTBR-213ENST00000544454 SCXQ7RTU7 201 aa8.78□□□□□ -1
LTBR-213ENST00000544454 BAGE3Q86Y29 109 aa8.78□□□□□ -1
LTBR-213ENST00000544454 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
LTBR-213ENST00000544454 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
LTBR-213ENST00000544454 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
LTBR-213ENST00000544454 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
LTBR-213ENST00000544454 TINCRA0A1B0GVN0 87 aa8.77□□□□□ -1.01
LTBR-213ENST00000544454 SCO1O75880 301 aa8.77□□□□□ -1.01
LTBR-213ENST00000544454 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
LTBR-213ENST00000544454 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
LTBR-213ENST00000544454 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1.01
LTBR-213ENST00000544454 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
LTBR-213ENST00000544454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
LTBR-213ENST00000544454 EPM2AB3EWF7 344 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 PANO1I0J062 215 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 KIAA0087Q14695 138 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 Q6ZRU5 148 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
LTBR-213ENST00000544454 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
LTBR-213ENST00000544454 HSBP1O75506 76 aa8.74□□□□□ -1.01
LTBR-213ENST00000544454 NDUFA6P56556 154 aa8.74□□□□□ -1.01
LTBR-213ENST00000544454 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
LTBR-213ENST00000544454 KRTAP4-5Q9BYR2 181 aa8.74□□□□□ -1.01
LTBR-213ENST00000544454 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
LTBR-213ENST00000544454 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
LTBR-213ENST00000544454 NDUFA1O15239 70 aa8.73□□□□□ -1.01
LTBR-213ENST00000544454 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
LTBR-213ENST00000544454 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
LTBR-213ENST00000544454 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
LTBR-213ENST00000544454 LOC107984640A0A0U1RRK4 108 aa8.72□□□□□ -1.01
LTBR-213ENST00000544454 PRSS2P07478 247 aa8.72□□□□□ -1.01
LTBR-213ENST00000544454 S100A1P23297 94 aa8.72□□□□□ -1.01
LTBR-213ENST00000544454 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
LTBR-213ENST00000544454 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
LTBR-213ENST00000544454 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
LTBR-213ENST00000544454 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 SERF1AO75920 110 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 IGLC3P0DOY3 106 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 Q5VSD8 79 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 Q8IZM0 81 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 FAM19A2Q8N3H0 131 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.02
LTBR-213ENST00000544454 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 A0A087WYN8 130 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 A0A096LNI7 61 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 H3BRM9 83 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 LINC00310P59036 64 aa8.7□□□□□ -1.02
LTBR-213ENST00000544454 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms