RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DDTP30046 118 aa20.64■□□□□ 0.9
CCM2-219ENST00000544363 DNAH10OSP0CZ25 163 aa20.63■□□□□ 0.89
CCM2-219ENST00000544363 BOD1L2Q8IYS8 172 aa20.63■□□□□ 0.89
CCM2-219ENST00000544363 UPK3BQ9BT76 320 aa20.63■□□□□ 0.89
CCM2-219ENST00000544363 SPINK8P0C7L1 97 aa20.62■□□□□ 0.89
CCM2-219ENST00000544363 TTTY13Q9BZ97 58 aa20.62■□□□□ 0.89
CCM2-219ENST00000544363 TP73-AS1Q9UF72 201 aa20.62■□□□□ 0.89
CCM2-219ENST00000544363 IGHV3-64A0A075B6Q5 118 aa20.61■□□□□ 0.89
CCM2-219ENST00000544363 LEPROTO15243 131 aa20.61■□□□□ 0.89
CCM2-219ENST00000544363 ENHOQ6UWT2 76 aa20.61■□□□□ 0.89
CCM2-219ENST00000544363 TRAV8-3A0A0A6YYJ7 113 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 IGHV3OR16-9A0A0B4J2B5 98 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 IGHV1-58A0A0C4DH39 117 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 SIVA1O15304 175 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 DLEU1O43261 78 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 XCL1P47992 114 aa20.6■□□□□ 0.89
CCM2-219ENST00000544363 CRPP02741 224 aa20.59■□□□□ 0.89
CCM2-219ENST00000544363 MAPKAPK5-AS1Q8N8E1 139 aa20.58■□□□□ 0.89
CCM2-219ENST00000544363 CHCHD10Q8WYQ3 142 aaPredicted RBP20.58■□□□□ 0.89
CCM2-219ENST00000544363 UBE2WQ96B02 151 aa20.58■□□□□ 0.89
CCM2-219ENST00000544363 PLEKHB2Q96CS7 222 aa20.58■□□□□ 0.89
CCM2-219ENST00000544363 J3QQQ9 107 aa20.57■□□□□ 0.88
CCM2-219ENST00000544363 TSPEAR-AS2P59090 65 aa20.57■□□□□ 0.88
CCM2-219ENST00000544363 IGLV10-54A0A075B6I4 117 aa20.56■□□□□ 0.88
CCM2-219ENST00000544363 SMIM1B2RUZ4 78 aa20.56■□□□□ 0.88
CCM2-219ENST00000544363 CD164L2Q6UWJ8 174 aa20.56■□□□□ 0.88
CCM2-219ENST00000544363 CSMD3Q7Z407 3707 aa20.55■□□□□ 0.88
CCM2-219ENST00000544363 A0A087WZ39 114 aa20.55■□□□□ 0.88
CCM2-219ENST00000544363 HNRNPA3P51991 378 aaKnown RBP20.55■□□□□ 0.88
CCM2-219ENST00000544363 IGLV5-39A0A0G2JS06 123 aa20.54■□□□□ 0.88
CCM2-219ENST00000544363 LGALS3P17931 250 aaKnown RBP20.54■□□□□ 0.88
CCM2-219ENST00000544363 TRAV8-4A0A0B4J246 113 aa20.53■□□□□ 0.88
CCM2-219ENST00000544363 MIAQ16674 131 aa20.53■□□□□ 0.88
CCM2-219ENST00000544363 C5orf38Q86SI9 138 aa20.53■□□□□ 0.88
CCM2-219ENST00000544363 MYMXA0A1B0GTQ4 84 aa20.53■□□□□ 0.88
CCM2-219ENST00000544363 ZFAND6Q6FIF0 208 aa20.52■□□□□ 0.88
CCM2-219ENST00000544363 UBE2DNLQ8IWF7 75 aa20.52■□□□□ 0.88
CCM2-219ENST00000544363 Q9H8V8 135 aa20.52■□□□□ 0.88
CCM2-219ENST00000544363 ZNF815PA8K554 130 aa20.51■□□□□ 0.87
CCM2-219ENST00000544363 LINC00587B1AMM8 73 aa20.49■□□□□ 0.87
CCM2-219ENST00000544363 C2orf91Q6ZV80 131 aa20.49■□□□□ 0.87
CCM2-219ENST00000544363 LINC01561Q8N1V8 128 aa20.49■□□□□ 0.87
CCM2-219ENST00000544363 MUC7Q8TAX7 377 aa20.49■□□□□ 0.87
CCM2-219ENST00000544363 FOXI1Q12951 378 aa20.48■□□□□ 0.87
CCM2-219ENST00000544363 GAGE12HA6NDE8 117 aa20.47■□□□□ 0.87
CCM2-219ENST00000544363 COX7A2LO14548 114 aa20.46■□□□□ 0.87
CCM2-219ENST00000544363 IBA57-AS1B1ANH7 110 aa20.45■□□□□ 0.86
CCM2-219ENST00000544363 CTAG1AP78358 180 aa20.45■□□□□ 0.86
CCM2-219ENST00000544363 C10orf126Q8N4M7 172 aa20.45■□□□□ 0.86
CCM2-219ENST00000544363 WWC2-AS2Q96NR7 200 aa20.45■□□□□ 0.86
CCM2-219ENST00000544363 PLECQ15149 4684 aaKnown RBP20.44■□□□□ 0.86
CCM2-219ENST00000544363 STARD9Q9P2P6 4700 aa20.44■□□□□ 0.86
CCM2-219ENST00000544363 HIGD1BQ9P298 99 aa20.42■□□□□ 0.86
CCM2-219ENST00000544363 NDUFA12Q9UI09 145 aa20.42■□□□□ 0.86
CCM2-219ENST00000544363 K7EP13 123 aa20.42■□□□□ 0.86
CCM2-219ENST00000544363 KRTAP26-1Q6PEX3 210 aa20.41■□□□□ 0.86
CCM2-219ENST00000544363 COX7B2Q8TF08 81 aa20.41■□□□□ 0.86
CCM2-219ENST00000544363 MALP21145 153 aa20.4■□□□□ 0.86
CCM2-219ENST00000544363 SCGB1D4Q6XE38 83 aa20.4■□□□□ 0.86
CCM2-219ENST00000544363 C1orf43Q9BWL3 253 aa20.4■□□□□ 0.86
CCM2-219ENST00000544363 TOMM7Q9P0U1 55 aa20.38■□□□□ 0.85
CCM2-219ENST00000544363 Q9HAA7 133 aa20.38■□□□□ 0.85
CCM2-219ENST00000544363 NDUFA1O15239 70 aa20.37■□□□□ 0.85
CCM2-219ENST00000544363 IGKV2D-24A0A075B6R9 120 aa20.36■□□□□ 0.85
CCM2-219ENST00000544363 LYSTQ99698 3801 aa20.36■□□□□ 0.85
CCM2-219ENST00000544363 APOMO95445 188 aa20.34■□□□□ 0.85
CCM2-219ENST00000544363 A0A0J9YXY3 114 aa20.33■□□□□ 0.84
CCM2-219ENST00000544363 Q8IZM0 81 aa20.33■□□□□ 0.84
CCM2-219ENST00000544363 ORAOV1Q8WV07 137 aa20.33■□□□□ 0.84
CCM2-219ENST00000544363 ZNF625Q96I27 306 aaPredicted RBP20.33■□□□□ 0.84
CCM2-219ENST00000544363 TGP01266 2768 aa20.32■□□□□ 0.84
CCM2-219ENST00000544363 PRSS2P07478 247 aa20.31■□□□□ 0.84
CCM2-219ENST00000544363 C6orf226Q5I0X4 101 aa20.31■□□□□ 0.84
CCM2-219ENST00000544363 RMI2Q96E14 147 aa20.3■□□□□ 0.84
CCM2-219ENST00000544363 KRTAP1-5Q9BYS1 174 aa20.3■□□□□ 0.84
CCM2-219ENST00000544363 HSD52Q0P140 79 aa20.29■□□□□ 0.84
CCM2-219ENST00000544363 DNAH1Q9P2D7 4330 aa20.29■□□□□ 0.84
CCM2-219ENST00000544363 KIAA0087Q14695 138 aa20.28■□□□□ 0.84
CCM2-219ENST00000544363 HERV-K104P63124 156 aa20.27■□□□□ 0.84
CCM2-219ENST00000544363 HINT1P49773 126 aaPredicted RBP20.27■□□□□ 0.83
CCM2-219ENST00000544363 M0R143 59 aa20.26■□□□□ 0.83
CCM2-219ENST00000544363 TENM2Q9NT68 2774 aa20.26■□□□□ 0.83
CCM2-219ENST00000544363 TAL2Q16559 108 aa20.25■□□□□ 0.83
CCM2-219ENST00000544363 CFAP161Q6P656 301 aa20.25■□□□□ 0.83
CCM2-219ENST00000544363 SFTA2Q6UW10 78 aa20.25■□□□□ 0.83
CCM2-219ENST00000544363 SNHG12Q9BXW3 62 aa20.25■□□□□ 0.83
CCM2-219ENST00000544363 SPANXB1Q9NS25 103 aaPredicted RBP20.25■□□□□ 0.83
CCM2-219ENST00000544363 CASC10Q5T4H9 136 aa20.24■□□□□ 0.83
CCM2-219ENST00000544363 HIST1H4GQ99525 98 aa20.24■□□□□ 0.83
CCM2-219ENST00000544363 SPAG11BQ08648 103 aa20.24■□□□□ 0.83
CCM2-219ENST00000544363 TTC32Q5I0X7 151 aa20.24■□□□□ 0.83
CCM2-219ENST00000544363 VPS13DQ5THJ4 4388 aa20.23■□□□□ 0.83
CCM2-219ENST00000544363 NBDYA0A0U1RRE5 68 aa20.22■□□□□ 0.83
CCM2-219ENST00000544363 TMEM238C9JI98 176 aa20.22■□□□□ 0.83
CCM2-219ENST00000544363 SRSF9Q13242 221 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCM2-219ENST00000544363 BVES-AS1Q5T3Y7 98 aa20.22■□□□□ 0.83
CCM2-219ENST00000544363 LITAFQ99732 161 aa20.22■□□□□ 0.83
CCM2-219ENST00000544363 C3orf84H3BNL1 204 aa20.21■□□□□ 0.83
CCM2-219ENST00000544363 TIMM17BO60830 172 aa20.21■□□□□ 0.83
CCM2-219ENST00000544363 CXCL5P42830 114 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms