RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
SP140-213ENST00000543928 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
SP140-213ENST00000543928 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
SP140-213ENST00000543928 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.98
SP140-213ENST00000543928 FUSP35637 526 aaKnown RBP eCLIP8.96□□□□□ -0.98
SP140-213ENST00000543928 UBE2D1P51668 147 aa8.96□□□□□ -0.98
SP140-213ENST00000543928 FAM19A2Q8N3H0 131 aa8.96□□□□□ -0.98
SP140-213ENST00000543928 NUPR1O60356 82 aa8.95□□□□□ -0.98
SP140-213ENST00000543928 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
SP140-213ENST00000543928 PKHD1P08F94 4074 aa8.95□□□□□ -0.98
SP140-213ENST00000543928 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
SP140-213ENST00000543928 ATP5LO75964 103 aa8.94□□□□□ -0.98
SP140-213ENST00000543928 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
SP140-213ENST00000543928 EPPK1P58107 5090 aaKnown RBP8.94□□□□□ -0.98
SP140-213ENST00000543928 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 LOC100996750A0A140TA64 210 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 COX7A2LO14548 114 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 PRSS1P07477 247 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 PMVKQ15126 192 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 CFAP161Q6P656 301 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 C5orf38Q86SI9 138 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 CST9LQ9H4G1 147 aa8.93□□□□□ -0.98
SP140-213ENST00000543928 DYNC1H1Q14204 4646 aaKnown RBP8.92□□□□□ -0.98
SP140-213ENST00000543928 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
SP140-213ENST00000543928 GHRHP01286 108 aa8.92□□□□□ -0.98
SP140-213ENST00000543928 MALP21145 153 aa8.92□□□□□ -0.98
SP140-213ENST00000543928 NDUFA6P56556 154 aa8.92□□□□□ -0.98
SP140-213ENST00000543928 COX6A2Q02221 97 aa8.92□□□□□ -0.98
SP140-213ENST00000543928 NTN5Q8WTR8 489 aaPredicted RBP8.92□□□□□ -0.98
SP140-213ENST00000543928 IGLV5-52A0A0A0MRZ9 124 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 A0A0J9YXV3 536 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
SP140-213ENST00000543928 C16orf90A8MZG2 172 aa8.9□□□□□ -0.98
SP140-213ENST00000543928 SEC11AP67812 179 aa8.9□□□□□ -0.98
SP140-213ENST00000543928 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
SP140-213ENST00000543928 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
SP140-213ENST00000543928 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
SP140-213ENST00000543928 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
SP140-213ENST00000543928 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
SP140-213ENST00000543928 HERVK_113P63121 156 aa8.89□□□□□ -0.99
SP140-213ENST00000543928 A0A087WZ39 114 aa8.88□□□□□ -0.99
SP140-213ENST00000543928 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
SP140-213ENST00000543928 APOMO95445 188 aa8.88□□□□□ -0.99
SP140-213ENST00000543928 FABP4P15090 132 aa8.88□□□□□ -0.99
SP140-213ENST00000543928 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
SP140-213ENST00000543928 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
SP140-213ENST00000543928 CDKN2A-AS1Q9UH64 79 aa8.87□□□□□ -0.99
SP140-213ENST00000543928 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
SP140-213ENST00000543928 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 SLPIP03973 132 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 IGLC3P0DOY3 106 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 GCSHP23434 173 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
SP140-213ENST00000543928 LINC00469Q8N7U9 141 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
SP140-213ENST00000543928 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SP140-213ENST00000543928 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 SPAG11BQ08648 103 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 OR10D4PQ8NGN7 298 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 CHAC1Q9BUX1 264 aa8.85□□□□□ -0.99
SP140-213ENST00000543928 IGLV5-45A0A087WSX0 123 aa8.84□□□□□ -0.99
SP140-213ENST00000543928 H0Y8G0 127 aa8.84□□□□□ -0.99
SP140-213ENST00000543928 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
SP140-213ENST00000543928 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
SP140-213ENST00000543928 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.83□□□□□ -1
SP140-213ENST00000543928 C11orf86A6NJI1 115 aa8.82□□□□□ -1
SP140-213ENST00000543928 F8VRH5 84 aa8.82□□□□□ -1
SP140-213ENST00000543928 C9orf163Q8N9P6 203 aa8.82□□□□□ -1
SP140-213ENST00000543928 MAP1LC3CQ9BXW4 147 aa8.82□□□□□ -1
SP140-213ENST00000543928 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
SP140-213ENST00000543928 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SP140-213ENST00000543928 H3BRM9 83 aa8.81□□□□□ -1
SP140-213ENST00000543928 SPINK8P0C7L1 97 aa8.81□□□□□ -1
SP140-213ENST00000543928 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
SP140-213ENST00000543928 SYCNQ0VAF6 134 aa8.81□□□□□ -1
SP140-213ENST00000543928 ODF1Q14990 250 aa8.81□□□□□ -1
SP140-213ENST00000543928 C2orf48Q96LS8 159 aa8.81□□□□□ -1
SP140-213ENST00000543928 CARD19Q96LW7 228 aa8.81□□□□□ -1
SP140-213ENST00000543928 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
SP140-213ENST00000543928 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
SP140-213ENST00000543928 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
SP140-213ENST00000543928 KIAA0087Q14695 138 aa8.8□□□□□ -1
SP140-213ENST00000543928 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
SP140-213ENST00000543928 S100A6P06703 90 aa8.79□□□□□ -1
SP140-213ENST00000543928 PRSS2P07478 247 aa8.79□□□□□ -1
SP140-213ENST00000543928 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
SP140-213ENST00000543928 Q6ZRU5 148 aa8.79□□□□□ -1
SP140-213ENST00000543928 F8WDY8 70 aa8.78□□□□□ -1
SP140-213ENST00000543928 SYS1-DBNDD2H3BUS1 97 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms